RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 SPDEFO95238 335 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 MC2RQ01718 297 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 COX15Q7KZN9 410 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 NDUFAF7Q7L592 441 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 ELMOD3Q96FG2 381 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 PLEKHF2Q9H8W4 249 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 CNIH4Q9P003 139 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 MOKQ9UQ07 419 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 CICQ96RK0 1608 aaPredicted RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 HCRTO43612 131 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 HIST2H3PS2Q5TEC6 136 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 FJX1Q86VR8 437 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 UBALD2Q8IYN6 164 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 CLECL1Q8IZS7 167 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 TMEM104Q8NE00 496 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 BRIX1Q8TDN6 353 aaKnown RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 CACFD1Q9UGQ2 172 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 NUMBLQ9Y6R0 609 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 LMO7Q8WWI1 1683 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 M0R3H8 397 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 CRYAAP02489 173 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 GLAP06280 429 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 ARAFP10398 606 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 SPP1P10451 314 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 LAMP1P11279 417 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 HIST1H1TP22492 207 aaPredicted RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 TGM1P22735 817 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 GRB2P62993 217 aaKnown RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 P2RY14Q15391 338 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 PQLC3Q8N755 202 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 ADAMTS14Q8WXS8 1223 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 CPNE4Q96A23 557 aaPredicted RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 FAM212BQ9NTI7 297 aaPredicted RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 C3P01024 1663 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 NPIPB15A6NHN6 443 aaPredicted RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF705GA8MUZ8 300 aaPredicted RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 MT-ND4P03905 459 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 DRD5P21918 477 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 ERHP84090 104 aaKnown RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 IER5LQ5T953 404 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 H2BFWTQ7Z2G1 175 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 OR1N1Q8NGS0 311 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 TCEAL7Q9BRU2 100 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 SIX2Q9NPC8 291 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 POLDIP2Q9Y2S7 368 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 K7EPK0 472 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 HOXB5P09067 269 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 TRHRP34981 398 aaPredicted RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 CDKN2DP55273 166 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 OR1Q1Q15612 314 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 ANKRD54Q6NXT1 300 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 PAPD4Q6PIY7 484 aaKnown RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 FAM71E2Q8N5Q1 922 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 BPIFCQ8NFQ6 507 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 DUSP19Q8WTR2 217 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 ISOC1Q96CN7 298 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 RAB3CQ96E17 227 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 SIGLEC10Q96LC7 697 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 KATNB1Q9BVA0 655 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 C1GALT1Q9NS00 363 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 C5AR2Q9P296 337 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 CSNK1G3Q9Y6M4 447 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 MED1Q15648 1581 aaPredicted RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 A0A1W2PQL4 384 aaPredicted RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 EXOSC7Q15024 291 aaKnown RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 SYT6Q5T7P8 510 aaPredicted RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 RNF113BQ8IZP6 322 aaKnown RBP10.42□□□□□ -0.74
SCN4A-201ENST00000435607 FBXL14Q8N1E6 418 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 PRRX2Q99811 253 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 HCFC1R1Q9NWW0 138 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 WDR37Q9Y2I8 494 aa10.42□□□□□ -0.74
SCN4A-201ENST00000435607 TBX10O75333 385 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 CTRB1P17538 263 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 ID4P47928 161 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 ZNF468Q5VIY5 522 aaPredicted RBP10.41□□□□□ -0.74
SCN4A-201ENST00000435607 CTRB2Q6GPI1 263 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 MFSD9Q8NBP5 474 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 GJC3Q8NFK1 279 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 GIMAP1Q8WWP7 306 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 ST8SIA2Q92186 375 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 LCORQ96JN0 433 aaPredicted RBP10.41□□□□□ -0.74
SCN4A-201ENST00000435607 TOX2Q96NM4 488 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 NMNAT1Q9HAN9 279 aaPredicted RBP10.41□□□□□ -0.74
SCN4A-201ENST00000435607 ABCC6O95255 1503 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 SNAP29O95721 258 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 RAB5CP51148 216 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 EVX2Q03828 476 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 ADGRG5Q8IZF4 528 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 FRMD1Q8N878 549 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 CHST11Q9NPF2 352 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 XRN1Q8IZH2 1706 aaKnown RBP10.41□□□□□ -0.74
SCN4A-201ENST00000435607 ARR3P36575 388 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 RAB40BQ12829 278 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 WFDC8Q8IUA0 241 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 OR1S2Q8NGQ3 325 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 KCNG3Q8TAE7 436 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 C3orf49Q96BT1 292 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 C4orf36Q96KX1 117 aa10.41□□□□□ -0.74
SCN4A-201ENST00000435607 OR7D2Q96RA2 312 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms