RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 RAB3CQ96E17 227 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 MED30Q96HR3 178 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 NSL1Q96IY1 281 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 DEFB129Q9H1M3 183 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 NHEJ1Q9H9Q4 299 aaPredicted RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 PLEKHA1Q9HB21 404 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 IL36RNQ9UBH0 155 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 B4GALT7Q9UBV7 327 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 APOBEC3BQ9UH17 382 aaKnown RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 C3orf18Q9UK00 162 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 AGO1Q9UL18 857 aaKnown RBP4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 PPP2R2CQ9Y2T4 447 aa4.54□□□□□ -1.68
HMGB3P10-201ENST00000434734 RAD50Q92878 1312 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 TMEM272A0A1B0GTI8 110 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 CCDC182A6NF36 153 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 ZNF587BE7ETH6 402 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 GFYI3L273 518 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 PRMT5O14744 637 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 RGS14O43566 566 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 NDUFB8O95169 186 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 TNFAIP8O95379 198 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 PLEKHA8P1O95397 391 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 OXSR1O95747 527 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 IFNA6P05013 189 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 KRT7P08729 469 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 HOXD4P09016 255 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 COILP38432 576 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 RBM34P42696 430 aaKnown RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 TUFMP49411 452 aaKnown RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 RPL10AP62906 217 aaKnown RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 TUBA4AP68366 448 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 RPL24P83731 157 aaKnown RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 IL9RQ01113 521 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 C2orf80Q0P641 193 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 TPBGQ13641 420 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 EIF2B1Q14232 305 aaKnown RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 C5orf64Q2M2E5 130 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 QRICH1Q2TAL8 776 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 RFTN2Q52LD8 501 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 CYBRD1Q53TN4 286 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 TTMPQ5BVD1 217 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 TRNP1Q6NT89 227 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 ADAM5Q6NVV9 412 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 TTC33Q6PID6 262 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 PRSS57Q6UWY2 283 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 OR2W3Q7Z3T1 314 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 TMEM25Q86YD3 366 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 ZNF547Q8IVP9 402 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 FAM89BQ8N5H3 189 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 RBMXL3Q8N7X1 1067 aaKnown RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 ZNF383Q8NA42 475 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 NECAP1Q8NC96 275 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 OR2T33Q8NG76 320 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 OR5D18Q8NGL1 313 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 OR2L2Q8NH16 312 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 TBCKQ8TEA7 893 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 ESR2Q92731 530 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 EXTL1Q92935 676 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 TOMM40LQ969M1 308 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 DGCR6LQ9BY27 220 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 MMP28Q9H239 520 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 SYT4Q9H2B2 425 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 PLAC1Q9HBJ0 212 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 PAQR5Q9NXK6 330 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 MAT2BQ9NZL9 334 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 ZNF282Q9UDV7 671 aaPredicted RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 WARS2Q9UGM6 360 aaKnown RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 RALYQ9UKM9 306 aaKnown RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 RCL1Q9Y2P8 373 aaKnown RBP4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 TIMM22Q9Y584 194 aa4.53□□□□□ -1.68
HMGB3P10-201ENST00000434734 A0A1B0GVT2 93 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 LINC01553A4QN01 128 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 TVP23AA6NH52 213 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 GOLGA6L10A6NI86 522 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 PLPP1O14494 284 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 ADAM10O14672 748 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 SGCEO43556 437 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 DUSP11O75319 330 aaKnown RBP4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 LYPLA2O95372 231 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 NADKO95544 446 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 HPP00738 406 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 BCKDHAP12694 445 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 FASP25445 335 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 AMTP48728 403 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 RARRES1P49788 294 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 XKP51811 444 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 AP3S2P59780 193 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 RPL8P62917 257 aaKnown RBP4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 MRPS22P82650 360 aaKnown RBP4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 DGCR2P98153 550 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 TFF2Q03403 129 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 ZNF85Q03923 595 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 SRSF1Q07955 248 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 CYP24A1Q07973 514 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 ST3GAL3Q11203 375 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 TMEM187Q14656 261 aa4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 MAD2L1BPQ15013 274 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 UAP1Q16222 522 aaPredicted RBP4.52□□□□□ -1.69
HMGB3P10-201ENST00000434734 TRIM16LQ309B1 348 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms