RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 LMO4P61968 165 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 SELENOTP62341 195 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 ZNF45Q02386 682 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 FBXL22Q6P050 247 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 ENPP6Q6UWR7 440 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 LRRC31Q6UY01 552 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 ZYG11AQ6WRX3 759 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 Q6ZN92 141 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 DHDDSQ86SQ9 333 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 PLA2G4DQ86XP0 818 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 C14orf178Q8N769 122 aaPredicted RBP4.45□□□□□ -1.7
USP54-206ENST00000433394 RNF139Q8WU17 664 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 MARC2Q969Z3 335 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 PAGE5Q96GU1 130 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 ZNF184Q99676 751 aaPredicted RBP4.45□□□□□ -1.7
USP54-206ENST00000433394 POLR2J2Q9GZM3 115 aaKnown RBP4.45□□□□□ -1.7
USP54-206ENST00000433394 POLR2J3Q9H1A7 115 aaKnown RBP4.45□□□□□ -1.7
USP54-206ENST00000433394 MARCH5Q9NX47 278 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 ZNF639Q9UID6 485 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 TRAF3IP3Q9Y228 551 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 PEX16Q9Y5Y5 336 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 V9GY05 133 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 DNMT1P26358 1616 aaKnown RBP4.45□□□□□ -1.7
USP54-206ENST00000433394 PLCH2O75038 1416 aa4.45□□□□□ -1.7
USP54-206ENST00000433394 GLI2P10070 1586 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 FAM168BA1KXE4 195 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 HEATR9A2RTY3 570 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 GOLGA8OA6NCC3 632 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 LOC110117498-PIK3R3F6TDL0 507 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 GOLGA8NF8WBI6 632 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 DCTN6O00399 190 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 PHOX2AO14813 284 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 BBOX1O75936 387 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 RBMY1CP0DJD4 496 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 CASP14P31944 242 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 BTDP43251 543 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 DSCR10P59022 87 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 IGLV3-21P80748 117 aaPredicted RBP4.44□□□□□ -1.7
USP54-206ENST00000433394 CDK16Q00536 496 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 BST1Q10588 318 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 GNMTQ14749 295 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 RCN1Q15293 331 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 DUSP7Q16829 419 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 KRTAP27-1Q3LI81 207 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 MARCH8Q5T0T0 291 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 TIGD3Q6B0B8 471 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 Q6ZR54 194 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 TRIM69Q86WT6 500 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 ECHDC2Q86YB7 292 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 OR1E3Q8WZA6 343 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 NARFLQ9H6Q4 476 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 SUDS3Q9H7L9 328 aaPredicted RBP4.44□□□□□ -1.7
USP54-206ENST00000433394 ZDHHC11Q9H8X9 412 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 ZNF702PQ9H963 129 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 NT5MQ9NPB1 228 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 RPS10P5Q9NQ39 176 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 SLC7A10Q9NS82 523 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 KLHL28Q9NXS3 571 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 ABCG2Q9UNQ0 655 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 HFM1A2PYH4 1435 aa4.44□□□□□ -1.7
USP54-206ENST00000433394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.43□□□□□ -1.7
USP54-206ENST00000433394 CROCC2H7BZ55 1655 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 ADGBQ8N7X0 1667 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 KLF18A0A0U1RQI7 1052 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 ABCD4O14678 606 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 HAT1O14929 419 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 ERLIN2O94905 339 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 P04436 131 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 UQCRFS1P1P0C7P4 283 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 ATP6V1B2P21281 511 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 IFNA8P32881 189 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 RGRP47804 291 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 TPMTP51580 245 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 SCRN3Q0VDG4 424 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 OR5I1Q13606 314 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 NSUN5P1Q3KNT7 163 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 C1orf146Q5VVC0 180 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 C11orf71Q6IPW1 123 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 UNQ9370/PRO34162Q6UXP9 181 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 FBXO16Q8IX29 292 aaPredicted RBP4.43□□□□□ -1.7
USP54-206ENST00000433394 OR4K14Q8NGD5 310 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 OR52H1Q8NGJ2 320 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 KCNG3Q8TAE7 436 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 ZPLD1Q8TCW7 415 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 TSNARE1Q96NA8 513 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 TBX15Q96SF7 602 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 KLHDC3Q9BQ90 382 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 FAM192AQ9GZU8 254 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 PPA2Q9H2U2 334 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 NIPAL2Q9H841 368 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 KCNIP1Q9NZI2 227 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 STAP1Q9ULZ2 295 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 ASF1AQ9Y294 204 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 MAST1Q9Y2H9 1570 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 CDC42BPBQ9Y5S2 1711 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 ADGRL2O95490 1459 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 CAMSAP2Q08AD1 1489 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 NEO1Q92859 1461 aa4.43□□□□□ -1.7
USP54-206ENST00000433394 ARHGAP5Q13017 1502 aa4.42□□□□□ -1.7
USP54-206ENST00000433394 GCC2Q8IWJ2 1684 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms