RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 CHRNA9Q9UGM1 479 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 SCML1Q9UN30 329 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 PPIEQ9UNP9 301 aaKnown RBP13.56□□□□□ -0.24
DDX56-205ENST00000433257 SLC17A4Q9Y2C5 497 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 A0A1B0GVC2 190 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 A6NIN4 97 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 MCRIP1C9JLW8 97 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 G3V3Q6 166 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 AGRPO00253 132 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 ARPC3O15145 178 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 GALR3O60755 368 aaPredicted RBP13.56□□□□□ -0.24
DDX56-205ENST00000433257 DNAJB6O75190 326 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 IGF2P01344 180 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 HIST1H2ABP04908 130 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 ALDOBP05062 364 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 SMIM10L1P0DMW3 83 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 DPP4P27487 766 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 RPS11P62280 158 aaKnown RBP eCLIP13.56□□□□□ -0.24
DDX56-205ENST00000433257 KIR2DS3Q14952 304 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 TP53I3Q53FA7 332 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 MANEAQ5SRI9 462 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 SLC25A25Q6KCM7 469 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 RGS7BPQ6MZT1 257 aaPredicted RBP13.56□□□□□ -0.24
DDX56-205ENST00000433257 ARSKQ6UWY0 536 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 APOOLQ6UXV4 268 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 DNM1P46Q6ZS02 220 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 HIST3H2AQ7L7L0 130 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 BEST4Q8NFU0 473 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 C1orf216Q8TAB5 229 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 CNOT9Q92600 299 aaKnown RBP13.56□□□□□ -0.24
DDX56-205ENST00000433257 HIST1H2ACQ93077 130 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 COL26A1Q96A83 441 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 PNPLA2Q96AD5 504 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 SMIM10Q96HG1 83 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 DDOQ99489 341 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 LGR4Q9BXB1 951 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 OR10A4Q9H209 315 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.56□□□□□ -0.24
DDX56-205ENST00000433257 NKIRAS2Q9NYR9 191 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 ZNF69Q9UC07 566 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 GNG8Q9UK08 70 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 MOKQ9UQ07 419 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 SLC6A5Q9Y345 797 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 AK6Q9Y3D8 172 aaKnown RBP13.56□□□□□ -0.24
DDX56-205ENST00000433257 SLC22A7Q9Y694 548 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 PIAS3Q9Y6X2 628 aa13.56□□□□□ -0.24
DDX56-205ENST00000433257 NCOR1O75376 2440 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 CIB4A0PJX0 185 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 A8MXK9 166 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 PCDH8O95206 1070 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 NTN1O95631 604 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 ZNF888P0CJ79 500 aaPredicted RBP13.55□□□□□ -0.24
DDX56-205ENST00000433257 SEC61A1P61619 476 aaKnown RBP13.55□□□□□ -0.24
DDX56-205ENST00000433257 GK2Q14410 553 aaPredicted RBP13.55□□□□□ -0.24
DDX56-205ENST00000433257 RNASE12Q5GAN4 147 aaKnown RBP13.55□□□□□ -0.24
DDX56-205ENST00000433257 SFRP4Q6FHJ7 346 aaPredicted RBP13.55□□□□□ -0.24
DDX56-205ENST00000433257 ULK3Q6PHR2 472 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 CHMP1BQ7LBR1 199 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 KRT77Q7Z794 578 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 C12orf40Q86WS4 652 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 DTX3Q8N9I9 347 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 OR52E2Q8NGJ4 325 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 OR52I2Q8NH67 350 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 THEM6Q8WUY1 208 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 OIT3Q8WWZ8 545 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 TM4SF19Q96DZ7 209 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 SGTBQ96EQ0 304 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 OR14A2Q96R54 314 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 SLC19A3Q9BZV2 496 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 SHARPINQ9H0F6 387 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 SLC6A15Q9H2J7 730 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 AUNIPQ9H7T9 357 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 TCF7L1Q9HCS4 588 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 EVA1BQ9NVM1 165 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 KCMF1Q9P0J7 381 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 THAP10Q9P2Z0 257 aaPredicted RBP13.55□□□□□ -0.24
DDX56-205ENST00000433257 NCDNQ9UBB6 729 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 UPB1Q9UBR1 384 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 CLEC4AQ9UMR7 237 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 DAPP1Q9UN19 280 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 FOXJ3Q9UPW0 622 aa13.55□□□□□ -0.24
DDX56-205ENST00000433257 ATF4P18848 351 aaPredicted RBP13.54□□□□□ -0.24
DDX56-205ENST00000433257 C5AR1P21730 350 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 ENPP1P22413 925 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 CFPP27918 469 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 GJA4P35212 333 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 PRPS1P60891 318 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 TOMM20Q15388 145 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 RPTNQ6XPR3 784 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 PDZD9Q8IXQ8 264 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 OR4D9Q8NGE8 314 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 OR51A7Q8NH64 312 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 SMAP2Q8WU79 429 aaPredicted RBP13.54□□□□□ -0.24
DDX56-205ENST00000433257 HOXB13Q92826 284 aaPredicted RBP13.54□□□□□ -0.24
DDX56-205ENST00000433257 REG4Q9BYZ8 158 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 DNTTIP1Q9H147 329 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 LDAHQ9H6V9 325 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 MCCC2Q9HCC0 563 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 NOX4Q9NPH5 578 aa13.54□□□□□ -0.24
DDX56-205ENST00000433257 MEPEQ9NQ76 525 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms