RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 RETREG3Q86VR2 466 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 SLC30A8Q8IWU4 369 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 PIAS4Q8N2W9 510 aaPredicted RBP15.47■□□□□ 0.07
NUP50-208ENST00000430547 C17orf78Q8N4C9 275 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 SMAP2Q8WU79 429 aaPredicted RBP15.47■□□□□ 0.07
NUP50-208ENST00000430547 GTPBP3Q969Y2 492 aaKnown RBP15.47■□□□□ 0.07
NUP50-208ENST00000430547 SLC47A1Q96FL8 570 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 RADILQ96JH8 1075 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 Q96MF0 132 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 MUS81Q96NY9 551 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 ALG2Q9H553 416 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 FGFR1OP2Q9NVK5 253 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 FAIMQ9NVQ4 179 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 NPAP1Q9NZP6 1156 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 POU2F3Q9UKI9 436 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 MGAT4BQ9UQ53 548 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 AMDHD2Q9Y303 409 aa15.47■□□□□ 0.07
NUP50-208ENST00000430547 USF3Q68DE3 2245 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 OR6C65A6NJZ3 312 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 VIMP08670 466 aaKnown RBP15.46■□□□□ 0.07
NUP50-208ENST00000430547 INHBBP09529 407 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 CDH2P19022 906 aaPredicted RBP15.46■□□□□ 0.07
NUP50-208ENST00000430547 PTAFRP25105 342 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 MPGP29372 298 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 ARFIP2P53365 341 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 CDH11P55287 796 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 FOXG1P55316 489 aaPredicted RBP15.46■□□□□ 0.07
NUP50-208ENST00000430547 ATP5J2P56134 94 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 IL1RL1Q01638 556 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 EGR4Q05215 589 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 MMEL1Q495T6 779 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 FAM69AQ5T7M9 428 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 NIPAL3Q6P499 406 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 CREB3L2Q70SY1 520 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 BIVMQ86UB2 503 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 COMTD1Q86VU5 262 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 PTOV1Q86YD1 416 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 DEPDC4Q8N2C3 294 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 ZIC4Q8N9L1 334 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 SMYD1Q8NB12 490 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 LILRB1Q8NHL6 650 aaPredicted RBP15.46■□□□□ 0.07
NUP50-208ENST00000430547 SLC26A7Q8TE54 656 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 NEUROG1Q92886 237 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 KTI12Q96EK9 354 aaPredicted RBP15.46■□□□□ 0.07
NUP50-208ENST00000430547 TRMT61AQ96FX7 289 aaKnown RBP15.46■□□□□ 0.07
NUP50-208ENST00000430547 BDH2Q9BUT1 245 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 PTDSS2Q9BVG9 487 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 CISD1Q9NZ45 108 aaKnown RBP15.46■□□□□ 0.07
NUP50-208ENST00000430547 MAGED1Q9Y5V3 778 aaPredicted RBP15.46■□□□□ 0.07
NUP50-208ENST00000430547 SLC25A15Q9Y619 301 aa15.46■□□□□ 0.07
NUP50-208ENST00000430547 FTCDNL1E5RQL4 147 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 ZNF587BE7ETH6 402 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 M0R1B8 84 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 PDLIM1O00151 329 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 AIM2O14862 343 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 MFN2O95140 757 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 WNT11O96014 354 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 OPN1SWP03999 348 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 ZNF43P17038 809 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 P2RY4P51582 365 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 DMTNQ08495 405 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 C1DQ13901 141 aaKnown RBP15.45■□□□□ 0.06
NUP50-208ENST00000430547 CYLC2Q14093 348 aaPredicted RBP15.45■□□□□ 0.06
NUP50-208ENST00000430547 SELPLGQ14242 412 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 OR1Q1Q15612 314 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 TRMT5Q32P41 509 aaKnown RBP15.45■□□□□ 0.06
NUP50-208ENST00000430547 INTS11Q5TA45 600 aaKnown RBP15.45■□□□□ 0.06
NUP50-208ENST00000430547 SLC22A25Q6T423 547 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 NET1Q7Z628 596 aaPredicted RBP15.45■□□□□ 0.06
NUP50-208ENST00000430547 PATL1Q86TB9 770 aaKnown RBP15.45■□□□□ 0.06
NUP50-208ENST00000430547 IGFBPL1Q8WX77 278 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 EPYCQ99645 322 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 PRR14Q9BWN1 585 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 AMBRA1Q9C0C7 1298 aa15.45■□□□□ 0.06
NUP50-208ENST00000430547 KAT8Q9H7Z6 458 aaKnown RBP15.45■□□□□ 0.06
NUP50-208ENST00000430547 TRAV36DV7A0A075B6V5 113 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 FAM171A2A8MVW0 826 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 M0QX08 132 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 NQO1P15559 274 aaKnown RBP15.44■□□□□ 0.06
NUP50-208ENST00000430547 PAX1P15863 534 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 SELENOPP49908 381 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 PCBP3P57721 371 aaKnown RBP15.44■□□□□ 0.06
NUP50-208ENST00000430547 SF3A3Q12874 501 aaKnown RBP eCLIP15.44■□□□□ 0.06
NUP50-208ENST00000430547 MFSD13AQ14CX5 517 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 MAPRE2Q15555 327 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 C1QTNF12Q5T7M4 302 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 OR10A6Q8NH74 314 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 TAAR8Q969N4 342 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 ALKBH3Q96Q83 286 aaPredicted RBP15.44■□□□□ 0.06
NUP50-208ENST00000430547 SH3GL1Q99961 368 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 C1QTNF6Q9BXI9 259 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 RSPO3Q9BXY4 272 aaPredicted RBP15.44■□□□□ 0.06
NUP50-208ENST00000430547 GSX1Q9H4S2 264 aaPredicted RBP15.44■□□□□ 0.06
NUP50-208ENST00000430547 SLC17A5Q9NRA2 495 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 ZNF701Q9NV72 531 aaPredicted RBP15.44■□□□□ 0.06
NUP50-208ENST00000430547 B3GALT5Q9Y2C3 310 aa15.44■□□□□ 0.06
NUP50-208ENST00000430547 A0A087WUJ7 227 aa15.43■□□□□ 0.06
NUP50-208ENST00000430547 A0A0B4J2E0 115 aa15.43■□□□□ 0.06
NUP50-208ENST00000430547 A0A1B0GX12 115 aa15.43■□□□□ 0.06
NUP50-208ENST00000430547 SHISA9B4DS77 424 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms