RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 NEK6Q9HC98 313 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 MMP25Q9NPA2 562 aa12.49□□□□□ -0.41
THBS3-202ENST00000428962 DHCR7Q9UBM7 475 aaKnown RBP12.49□□□□□ -0.41
THBS3-202ENST00000428962 A0A1W2PQD3 144 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 OR6C68A6NDL8 312 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 ZNF879B4DU55 563 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 BLOC1S5-TXNDC5H3BN57 136 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 TO15178 435 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 OIP5O43482 229 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 HIST1H2ABP04908 130 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 GLB1P16278 677 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 EDNRAP25101 427 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 AQP2P41181 271 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 KIR2DL3P43628 341 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 AFF3P51826 1226 aaKnown RBP12.48□□□□□ -0.41
THBS3-202ENST00000428962 DBPQ10586 325 aaPredicted RBP12.48□□□□□ -0.41
THBS3-202ENST00000428962 MADCAM1Q13477 382 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 EBPQ15125 230 aaKnown RBP12.48□□□□□ -0.41
THBS3-202ENST00000428962 GXYLT1Q4G148 440 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 ATAD3CQ5T2N8 411 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 FAM27D1Q5T7N8 215 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 ARHGAP40Q5TG30 622 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 HACD4Q5VWC8 232 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 TRILQ7L0X0 811 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 HIST3H2AQ7L7L0 130 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 NANOGNBQ7Z5D8 188 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 RFLNBQ8N5W9 214 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 OR1L3Q8NH93 324 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 TRMT10AQ8TBZ6 339 aaKnown RBP12.48□□□□□ -0.41
THBS3-202ENST00000428962 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.48□□□□□ -0.41
THBS3-202ENST00000428962 HIST1H2ACQ93077 130 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 SLC41A2Q96JW4 573 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 ADOQ96SZ5 270 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 KCNJ15Q99712 375 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 TTTY10Q9BZA0 68 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 RXFP3Q9NSD7 469 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 SEMA5BQ9P283 1151 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 A0A0G2JK05 382 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 TRBV2A0A0J9YWF9 115 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 A0A1B0GX78 115 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 ANKRD61A6NGH8 418 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 OR6C76A6NM76 312 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 NOTOA8MTQ0 251 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 FLRT2O43155 660 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
THBS3-202ENST00000428962 SELENOFO60613 162 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 ICOSLGO75144 302 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 TXNDC12O95881 172 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 UCHL1P09936 223 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 ASAH2BP0C7U1 165 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 PITPNBP48739 271 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 OR10A3P58181 314 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 CTXN1P60606 82 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 MRPL28Q13084 256 aaKnown RBP12.48□□□□□ -0.41
THBS3-202ENST00000428962 WDR45BQ5MNZ6 344 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 ZNF57Q68EA5 555 aaPredicted RBP12.48□□□□□ -0.41
THBS3-202ENST00000428962 SLC6A19Q695T7 634 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 CBLN3Q6UW01 205 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 SLC29A4Q7RTT9 530 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 FAM122BQ7Z309 247 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 LRRC75AQ8NAA5 344 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 LSM14AQ8ND56 463 aaKnown RBP12.48□□□□□ -0.41
THBS3-202ENST00000428962 DUSP18Q8NEJ0 188 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 ALG12Q9BV10 488 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 NUDT9Q9BW91 350 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 HDHD2Q9H0R4 259 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 FKRPQ9H9S5 495 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 ABRACLQ9P1F3 81 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 WNT16Q9UBV4 365 aa12.48□□□□□ -0.41
THBS3-202ENST00000428962 A0A0G2JMP0 313 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 A0A0X1KG70 313 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 FAM240BA0A1B0GVZ2 78 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 BCAT2O15382 392 aaPredicted RBP12.47□□□□□ -0.41
THBS3-202ENST00000428962 CDC40O60508 579 aaKnown RBP eCLIP12.47□□□□□ -0.41
THBS3-202ENST00000428962 CPNE3O75131 537 aaKnown RBP12.47□□□□□ -0.41
THBS3-202ENST00000428962 TRIM3O75382 744 aaPredicted RBP12.47□□□□□ -0.41
THBS3-202ENST00000428962 SERPINI2O75830 405 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 EIF4EP06730 217 aaKnown RBP12.47□□□□□ -0.41
THBS3-202ENST00000428962 PSKH1P11801 424 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 HLA-DMAP28067 261 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 TACR3P29371 465 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 UQCRC1P31930 480 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 HCCSP53701 268 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 PLCXD2Q0VAA5 305 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 NSDHLQ15738 373 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 TBRG1Q3YBR2 411 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 ZFP69Q49AA0 526 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 SNAP47Q5SQN1 464 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 GPR139Q6DWJ6 353 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 PYHIN1Q6K0P9 492 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 APOOLQ6UXV4 268 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 BAIAP2L2Q6UXY1 529 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 SLC16A9Q7RTY1 509 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 OVCH1Q7RTY7 1134 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 FAM220AQ7Z4H9 259 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 KCTD20Q7Z5Y7 419 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 OR4M2Q8NGB6 313 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 OR4M1Q8NGD0 313 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 DNASE2BQ8WZ79 361 aa12.47□□□□□ -0.41
THBS3-202ENST00000428962 RFT1Q96AA3 541 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms