RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 OPN1MW2P0DN77 364 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 OPN1MW3P0DN78 364 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 SPTBP11277 2137 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 POU2F1P14859 743 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 PSMA2P25787 234 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 SDC4P31431 198 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 HSPA9P38646 679 aaKnown RBP3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 HTR2BP41595 481 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 SMSP52788 366 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 GFERP55789 205 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 HPCAP84074 193 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 RBPJQ06330 500 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 HSPB3Q12988 150 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 RFTN1Q14699 578 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 EXT1Q16394 746 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 SNAPC1Q16533 368 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 NTRK2Q16620 822 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 PHKG1Q16816 387 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 AARDQ4LEZ3 155 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 CMPK2Q5EBM0 449 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 SHEQ5VZ18 495 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 METTL21CQ5VZV1 264 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 RPUSD3Q6P087 351 aaKnown RBP3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 Q6ZR54 194 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 TMEM26Q6ZUK4 368 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 STRADAQ7RTN6 431 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 NUP54Q7Z3B4 507 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZNF677Q86XU0 584 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 TMEM126BQ8IUX1 230 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 CROCCP3Q8IVE0 287 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 LINC00346Q8IVM7 164 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 CDH26Q8IXH8 852 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 TAGAPQ8N103 731 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 METTL4Q8N3J2 472 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 TBC1D19Q8N5T2 526 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 C10orf53Q8N6V4 93 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 BCORP1Q8N888 145 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 RTL3Q8N8U3 475 aaKnown RBP3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 OR10S1Q8NGN2 331 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 FANK1Q8TC84 345 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 ASZ1Q8WWH4 475 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 ITLN2Q8WWU7 325 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC22A18Q96BI1 424 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 AP2M1Q96CW1 435 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZNF514Q96K75 400 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 SEPHS2Q99611 448 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 LPAR4Q99677 370 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 ACAT2Q9BWD1 397 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 DPH5Q9H2P9 285 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 SP140LQ9H930 580 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 AKIRIN1Q9H9L7 192 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 GLRX2Q9NS18 164 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 GIMAP4Q9NUV9 329 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 OLAHQ9NV23 265 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 FAIMQ9NVQ4 179 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 TAS2R7Q9NYW3 318 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 STMN3Q9NZ72 180 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 LHX3Q9UBR4 397 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 TBC1D29Q9UFV1 150 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC7A8Q9UHI5 535 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 BAIAP2L1Q9UHR4 511 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 DNPEPQ9ULA0 475 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 CHTOPQ9Y3Y2 248 aaKnown RBP3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 L3MBTL1Q9Y468 752 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 CACNA1CQ13936 2221 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 ABCA4P78363 2273 aa3.87□□□□□ -1.79
HMGB3P5-201ENST00000428894 LOC105371242A0A075B767 164 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 TRGV8A0A0C4DH27 118 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 ARHGAP42A6NI28 874 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 NCF1BA6NI72 391 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZSCAN5BA6NJL1 495 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 SLC9B1P1A6NJY1 282 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 NCF1CA8MVU1 366 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 C9J4A7 227 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 H3BQF6 201 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 CCL21O00585 134 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 TRAFD1O14545 582 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 ARPC2O15144 300 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 GATCO43716 136 aaKnown RBP3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 KERAO60938 352 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 GOSR1O95249 250 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 ANP32DO95626 131 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 ABCB1P08183 1280 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 HBQ1P09105 142 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 DNAH10OSP0CZ25 163 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 FOLR1P15328 257 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 PFKFB1P16118 471 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 ZNF30P17039 623 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 RPL35AP18077 110 aaKnown RBP3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 MPZP25189 248 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 HNRNPH3P31942 346 aaKnown RBP3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 PCK1P35558 622 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 NUP62P37198 522 aaPredicted RBP3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 CAPZBP47756 277 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 STARP49675 285 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 RAP1GDS1P52306 607 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 ARFIP1P53367 373 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 MAPK12P53778 367 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 IST1P53990 364 aa3.86□□□□□ -1.79
HMGB3P5-201ENST00000428894 AIF1P55008 147 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms