RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 AQP2P41181 271 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 HMGA2P52926 109 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 NUDT6P53370 316 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 OR7A5Q15622 319 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 SLC25A25Q6KCM7 469 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 FAHD1Q6P587 224 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 SLC15A4Q8N697 577 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 FADS6Q8N9I5 356 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 CYB561A3Q8NBI2 242 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZPLD1Q8TCW7 415 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 OTULINQ96BN8 352 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 SGCZQ96LD1 299 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 PTDSS2Q9BVG9 487 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 ADAM19Q9H013 955 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 POLR2J3Q9H1A7 115 aaKnown RBP8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 ADNPQ9H2P0 1102 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 UBQLN3Q9H347 655 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 FN3KQ9H479 309 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 ARMC7Q9H6L4 198 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 TRIM45Q9H8W5 580 aaPredicted RBP8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 PALMDQ9NP74 551 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 TBC1D23Q9NUY8 699 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 HIVEP3Q5T1R4 2406 aa8.58□□□□□ -1.04
HMGCLL1-206ENST00000428842 ROS1P08922 2347 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 INTS1Q8N201 2190 aaKnown RBP8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 CELSR2Q9HCU4 2923 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 SVEP1Q4LDE5 3571 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 ANKUB1A6NFN9 424 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 TTC36A6NLP5 189 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 MCIDASD6RGH6 385 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 SLC1A7O00341 560 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 SNPHO15079 494 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 NME2P1O60361 137 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 GYPBP06028 91 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 CCDC159P0C7I6 412 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 CLUP10909 449 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 IMPDH2P12268 514 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF182P17025 639 aaPredicted RBP8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 NME2P22392 152 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 ENPP1P22413 925 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 AHCYP23526 432 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 CASRP41180 1078 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 PPIAP62937 165 aaKnown RBP8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 PTGES3Q15185 160 aaKnown RBP8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 JMJD6Q6NYC1 403 aaPredicted RBP8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 LYPD4Q6UWN0 246 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 LINC00114Q6XXX2 140 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 LRRC69Q6ZNQ3 347 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 NCCRP1Q6ZVX7 275 aaPredicted RBP8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 MBOAT2Q6ZWT7 520 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 TRILQ7L0X0 811 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 SLC46A3Q7Z3Q1 461 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 EXD3Q8N9H8 876 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 OR51L1Q8NGJ5 315 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 OR5M9Q8NGP3 310 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 HAS2Q92819 552 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 PLEKHA8Q96JA3 519 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 FRMD6Q96NE9 622 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 CNTNAP3BQ96NU0 1288 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 IP6K3Q96PC2 410 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 CNTNAP3Q9BZ76 1288 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 TRIM2Q9C040 744 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF703Q9H7S9 590 aaPredicted RBP8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZFP64Q9NPA5 681 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 RHBDL2Q9NX52 303 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 PCDHGB1Q9Y5G3 927 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 LRRK2Q5S007 2527 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 HRNRQ86YZ3 2850 aaPredicted RBP8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 POLEQ07864 2286 aa8.57□□□□□ -1.04
HMGCLL1-206ENST00000428842 FAM171A2A8MVW0 826 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 NPIPA5E9PKD4 350 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 EIF4E2O60573 245 aaKnown RBP8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 GPANK1O95872 356 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 BCL10O95999 233 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF12P17014 697 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 CNR1P21554 472 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 B3GALT5-AS1P59052 145 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 RPP38P78345 283 aaKnown RBP8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 LGALS3BPQ08380 585 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 NPRL3Q12980 569 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 MYBPHQ13203 477 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF613Q6PF04 617 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 SLC16A12Q6ZSM3 486 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF554Q86TJ5 538 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 OAFQ86UD1 273 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 GPAT4Q86UL3 456 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 CMIPQ8IY22 773 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 BPIFB6Q8NFQ5 453 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 OR4Q3Q8NH05 313 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 TRUB1Q8WWH5 349 aaKnown RBP8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 ABTB1Q969K4 478 aaPredicted RBP8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 TSSK2Q96PF2 358 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 ZNF426Q9BUY5 554 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 EMC6Q9BV81 110 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 HCAR1Q9BXC0 346 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 PAK1IP1Q9NWT1 392 aaPredicted RBP8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 CHRNA9Q9UGM1 479 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 CLEC4AQ9UMR7 237 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 NPIPA1Q9UND3 350 aa8.56□□□□□ -1.04
HMGCLL1-206ENST00000428842 MED31Q9Y3C7 131 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms