RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 STX1BP61266 288 aa14.93□□□□□ -0.02
TRIM39-209ENST00000428728 RGNQ15493 299 aa14.93□□□□□ -0.02
TRIM39-209ENST00000428728 ZSWIM7Q19AV6 140 aa14.93□□□□□ -0.02
TRIM39-209ENST00000428728 NIPAL3Q6P499 406 aa14.93□□□□□ -0.02
TRIM39-209ENST00000428728 GTF2H4Q92759 462 aa14.93□□□□□ -0.02
TRIM39-209ENST00000428728 SLC25A36Q96CQ1 311 aa14.93□□□□□ -0.02
TRIM39-209ENST00000428728 IFT52Q9Y366 437 aa14.93□□□□□ -0.02
TRIM39-209ENST00000428728 A0A096LNT2 108 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 A0A096LPI6 279 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 C5orf58C9J3I9 102 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 H7C417 338 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 LY6HO94772 140 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 PNMTP11086 282 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 GTF2E2P29084 291 aaKnown RBP14.92□□□□□ -0.02
TRIM39-209ENST00000428728 RPS5P46782 204 aaKnown RBP14.92□□□□□ -0.02
TRIM39-209ENST00000428728 TBRG1Q3YBR2 411 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 CREB3L2Q70SY1 520 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 KDM8Q8N371 416 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 GOLGA6L1Q8N7Z2 621 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 OR1K1Q8NGR3 316 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 BBS10Q8TAM1 723 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 STK35Q8TDR2 534 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 FBXO17Q96EF6 278 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 RAD21L1Q9H4I0 556 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 PIF1Q9H611 641 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 A4GALTQ9NPC4 353 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 TMEM45AQ9NWC5 275 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 RASD1Q9Y272 281 aa14.92□□□□□ -0.02
TRIM39-209ENST00000428728 IGHV1-18A0A0C4DH31 117 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 ELOA3DA6NLF2 546 aaPredicted RBP14.91□□□□□ -0.02
TRIM39-209ENST00000428728 NR5A2O00482 541 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 POLR3GO15318 223 aaPredicted RBP14.91□□□□□ -0.02
TRIM39-209ENST00000428728 NPIPB7O75200 414 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 ERLIN1O75477 346 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 VAMP5O95183 116 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 HOXB9P17482 250 aaPredicted RBP14.91□□□□□ -0.02
TRIM39-209ENST00000428728 APOBEC3AP31941 199 aaPredicted RBP14.91□□□□□ -0.02
TRIM39-209ENST00000428728 UBE2NP61088 152 aaKnown RBP14.91□□□□□ -0.02
TRIM39-209ENST00000428728 TUBA1BP68363 451 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 TUBA4AP68366 448 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 CHRNB3Q05901 458 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 FADDQ13158 208 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 ELOA3BQ3SY89 546 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 EPGNQ6UW88 154 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 TUBA1AQ71U36 451 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 LINGO2Q7L985 606 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 CXXC5Q7LFL8 322 aaKnown RBP14.91□□□□□ -0.02
TRIM39-209ENST00000428728 EPHX4Q8IUS5 362 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 ELOA3Q8NG57 546 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 OR10H5Q8NGA6 315 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 NFKBIDQ8NI38 313 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 FAM168AQ92567 244 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 KCNS3Q9BQ31 491 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 PTDSS2Q9BVG9 487 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 TCF7L2Q9NQB0 619 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 RPS6KB2Q9UBS0 482 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 SEC14L4Q9UDX3 406 aa14.91□□□□□ -0.02
TRIM39-209ENST00000428728 MALRD1Q5VYJ5 2156 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 A0A096LPE4 126 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 A0A1W2PPZ6 126 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 A8MV72 311 aaPredicted RBP14.9□□□□□ -0.02
TRIM39-209ENST00000428728 FTCDNL1E5RQL4 147 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 UPK3AO75631 287 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 BMP2P12643 396 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 BMP4P12644 408 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 CLDN17P56750 224 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 DSCR9P59020 149 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 IL1RL1Q01638 556 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 EGR4Q05215 589 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 TMEM249Q2WGJ8 235 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 HMBOX1Q6NT76 420 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 MFSD8Q8NHS3 518 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 KTI12Q96EK9 354 aaPredicted RBP14.9□□□□□ -0.02
TRIM39-209ENST00000428728 SLC38A2Q96QD8 506 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 BCL2L10Q9HD36 194 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 SLC25A37Q9NYZ2 338 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 PRDM4Q9UKN5 801 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 PMF1-BGLAPU3KQ54 211 aa14.9□□□□□ -0.02
TRIM39-209ENST00000428728 SLC25A16P16260 332 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 EFNA4P52798 201 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 ROR2Q01974 943 aaKnown RBP14.89□□□□□ -0.03
TRIM39-209ENST00000428728 BEND6Q5SZJ8 279 aaPredicted RBP14.89□□□□□ -0.03
TRIM39-209ENST00000428728 C6orf52Q5T4I8 152 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 GCNT6Q5T4J0 391 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 C1QTNF12Q5T7M4 302 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 COMTD1Q86VU5 262 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 HIPK1Q86Z02 1210 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 MSRB3Q8IXL7 192 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 C10orf111Q8N326 155 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 NANOS1Q8WY41 292 aaKnown RBP14.89□□□□□ -0.03
TRIM39-209ENST00000428728 TNFRSF13CQ96RJ3 184 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 EBF4Q9BQW3 602 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 SLCO1B3Q9NPD5 702 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 OBP2BQ9NPH6 170 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 CCDC167Q9P0B6 97 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 SLAMF8Q9P0V8 285 aa14.89□□□□□ -0.03
TRIM39-209ENST00000428728 A0A1B0GWA3 101 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 OR6C65A6NJZ3 312 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 M0R082 166 aa14.88□□□□□ -0.03
TRIM39-209ENST00000428728 ARAFP10398 606 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms