RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 MSRB3Q8IXL7 192 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 POMGNT2Q8NAT1 580 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 OR1K1Q8NGR3 316 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 ITCHQ96J02 903 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 ALKBH3Q96Q83 286 aaPredicted RBP13.54□□□□□ -0.24
SEC13-210ENST00000428626 SEC61A2Q9H9S3 476 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 SLC25A37Q9NYZ2 338 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 CALML5Q9NZT1 146 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 SLAMF8Q9P0V8 285 aa13.54□□□□□ -0.24
SEC13-210ENST00000428626 A0A0G2JPF8 293 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 HNRNPCL2B2RXH8 293 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 HNRNPCL3B7ZW38 293 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 SLCO1B7G3V0H7 640 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 UBDO15205 165 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 HNRNPCL1O60812 293 aaKnown RBP13.53□□□□□ -0.24
SEC13-210ENST00000428626 HNRNPCL4P0DMR1 293 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 APOBEC3AP31941 199 aaPredicted RBP13.53□□□□□ -0.24
SEC13-210ENST00000428626 PRPS1P60891 318 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 COPZ1P61923 177 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 TUBA1BP68363 451 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 TUBA4AP68366 448 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 TGFBR3Q03167 851 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 LOXL1Q08397 574 aaPredicted RBP13.53□□□□□ -0.24
SEC13-210ENST00000428626 C6orf10Q5SRN2 563 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 C6orf52Q5T4I8 152 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 ATG16L1Q676U5 607 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 TMEM225Q6GV28 225 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 HMBOX1Q6NT76 420 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 CLEC2AQ6UVW9 174 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 MSANTD1Q6ZTZ1 278 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 TUBA1AQ71U36 451 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 CROCCP2Q86T23 111 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 DEPDC4Q8N2C3 294 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 C10orf105Q8TEF2 133 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 BCL2L2Q92843 193 aaPredicted RBP13.53□□□□□ -0.24
SEC13-210ENST00000428626 KTI12Q96EK9 354 aaPredicted RBP13.53□□□□□ -0.24
SEC13-210ENST00000428626 TNFRSF13CQ96RJ3 184 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 PRR14Q9BWN1 585 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 TAPBPLQ9BX59 468 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 PIF1Q9H611 641 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 TMBIM4Q9HC24 238 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 BCL2L10Q9HD36 194 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 B3GAT1Q9P2W7 334 aa13.53□□□□□ -0.24
SEC13-210ENST00000428626 A8MV72 311 aaPredicted RBP13.52□□□□□ -0.25
SEC13-210ENST00000428626 FZD7O75084 574 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 PNMTP11086 282 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 BMP2P12643 396 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 NCF2P19878 526 aaPredicted RBP13.52□□□□□ -0.25
SEC13-210ENST00000428626 HTR2AP28223 471 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 LARS2Q15031 903 aaKnown RBP13.52□□□□□ -0.25
SEC13-210ENST00000428626 ZNF311Q5JNZ3 666 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 PRAMEF8Q5VWM4 474 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 PRAMEF7Q5VXH5 474 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 NIPAL3Q6P499 406 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 EPGNQ6UW88 154 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 MYPOPQ86VE0 399 aaPredicted RBP13.52□□□□□ -0.25
SEC13-210ENST00000428626 FUNDC1Q8IVP5 155 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 SPATA3Q8NHX4 192 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 STK35Q8TDR2 534 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 FBXO17Q96EF6 278 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 ZNF837Q96EG3 531 aaPredicted RBP13.52□□□□□ -0.25
SEC13-210ENST00000428626 SORCS2Q96PQ0 1159 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 RMND5AQ9H871 391 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 FKRPQ9H9S5 495 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 A4GALTQ9NPC4 353 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 SLC52A3Q9NQ40 469 aa13.52□□□□□ -0.25
SEC13-210ENST00000428626 IGKV1D-42A0A075B6H8 117 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 A0A096LPE4 126 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 A0A1W2PPZ6 126 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 ZNF503-AS2A6NEH8 195 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 CLIC1O00299 241 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 ZNF432O94892 652 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 CALCRP30988 508 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 RPS5P46782 204 aaKnown RBP13.51□□□□□ -0.25
SEC13-210ENST00000428626 EFNA4P52798 201 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 DSCR9P59020 149 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 VLDLRP98155 873 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 GLIPR1L2Q4G1C9 344 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 MIER2Q8N344 545 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 MFSD8Q8NHS3 518 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 FAM168AQ92567 244 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 SLC25A36Q96CQ1 311 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 SLC38A2Q96QD8 506 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 WFDC6Q9BQY6 131 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 TMEM45AQ9NWC5 275 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 ZNF232Q9UNY5 417 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 USH1CQ9Y6N9 552 aa13.51□□□□□ -0.25
SEC13-210ENST00000428626 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.51□□□□□ -0.253e-10■■□□□ 12.4
SEC13-210ENST00000428626 VWC2LB2RUY7 222 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 ZNF587BE7ETH6 402 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 TPST1O60507 370 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 VAMP5O95183 116 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 AHSA1O95433 338 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 WNT11O96014 354 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 F12P00748 615 aaPredicted RBP13.5□□□□□ -0.25
SEC13-210ENST00000428626 CELA3BP08861 270 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 CECR9P0C854 216 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 IGHV4-31P0DP07 118 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 SLC25A16P16260 332 aa13.5□□□□□ -0.25
SEC13-210ENST00000428626 CLDN17P56750 224 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms