RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 SUPT7LO94864 414 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 SNAPINO95295 136 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 AP2A1O95782 977 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 TIMP1P01033 207 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 IGLV1-47P01700 117 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 IGHV3-48P01763 117 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 P04436 131 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 LGALS2P05162 132 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 HPNP05981 417 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 GPR89BP0CG08 455 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 DBTP11182 482 aaKnown RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF44P15621 663 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 MMP11P24347 488 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 SHMT2P34897 504 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 RPL13AP40429 203 aaKnown RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 BTDP43251 543 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 P2RY1P47900 373 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 HNMTP50135 292 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 WNT4P56705 351 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 KRTAP10-8P60410 259 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 SELENOTP62341 195 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 MAP2K1Q02750 393 aaPredicted RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 TLE4Q04727 773 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 KLRC3Q07444 240 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 FGL1Q08830 312 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 RIPK1Q13546 671 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 IDI1Q13907 227 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 PDK3Q15120 406 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 LRRC23Q53EV4 343 aaPredicted RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 SAMD4BQ5PRF9 694 aaKnown RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 HSDL2Q6YN16 418 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 ACOT7LQ6ZUV0 252 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 CENPQQ7L2Z9 268 aaPredicted RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 ZNF571Q7Z3V5 609 aaPredicted RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 FAM220AQ7Z4H9 259 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 SVOPLQ8N434 492 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 FTMTQ8N4E7 242 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 Q8N7P7 452 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 FANK1Q8TC84 345 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 DNAJA4Q8WW22 397 aaPredicted RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 FRAT1Q92837 279 aaPredicted RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 FGF11Q92914 225 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 NUS1Q96E22 293 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 CLCC1Q96S66 551 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 TBX15Q96SF7 602 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 NAT9Q9BTE0 207 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 ZSCAN5AQ9BUG6 496 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 LRRN3Q9H3W5 708 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 RBKSQ9H477 322 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 ZDHHC11Q9H8X9 412 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 PLGRKTQ9HBL7 147 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 SH2D2AQ9NP31 389 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 C6orf203Q9P0P8 240 aaPredicted RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 PTBP2Q9UKA9 531 aaKnown RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 TMCO1Q9UM00 188 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 RASD1Q9Y272 281 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 UGT2A1Q9Y4X1 527 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 V9GY05 133 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 FAM135BQ49AJ0 1406 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 PPIP5K1Q6PFW1 1433 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 NSD3Q9BZ95 1437 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 YTHDC2Q9H6S0 1430 aaKnown RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 YEATS2Q9ULM3 1422 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 NRKQ7Z2Y5 1582 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 RGPD1P0DJD0 1748 aa1.71□□□□□ -2.14
PTPRC-208ENST00000427110 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.71□□□□□ -2.14
PTPRC-208ENST00000427110 CHD2O14647 1828 aaKnown RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 TUBGCP6Q96RT7 1819 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 IQANK1A0A1B0GTG1 560 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 A8MXQ7 604 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 IDSB3KWA1 339 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 TRIM49D1C9J1S8 452 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 MBTPS2O43462 519 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 DIRAS1O95057 198 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 KLF8O95600 359 aaPredicted RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 OPN1MWP04001 364 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 KLK3P07288 261 aaPredicted RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 OPN1MW2P0DN77 364 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 OPN1MW3P0DN78 364 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 ELK1P19419 428 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 COX5AP20674 150 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 PCMT1P22061 227 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 GLRA2P23416 452 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 COX7A1P24310 79 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 CD1BP29016 333 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 CALCRP30988 508 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 ANP32AP39687 249 aaKnown RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 KLK7P49862 253 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 GBX2P52951 348 aaPredicted RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 APOC4P55056 127 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 SPIBQ01892 262 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 CPSF1Q10570 1443 aaKnown RBP1.7□□□□□ -2.14
PTPRC-208ENST00000427110 PSG7Q13046 419 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 NSDHLQ15738 373 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 SLC15A2Q16348 729 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 NSUN5P1Q3KNT7 163 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 C2orf83Q53S99 150 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 DMRTC1Q5HYR2 192 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 PAGE3Q5JUK9 113 aa1.7□□□□□ -2.14
PTPRC-208ENST00000427110 C1orf146Q5VVC0 180 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms