RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 LINGO2Q7L985 606 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 TREML1Q86YW5 311 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 NATD1Q8N6N6 113 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 SYT14Q8NB59 555 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 OR5AK3PQ8NH89 298 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 DVL3Q92997 716 aaPredicted RBP12.16□□□□□ -0.46
HDAC6-206ENST00000426196 SYT3Q9BQG1 590 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 C1QTNF5Q9BXJ0 243 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 ZNF385DQ9H6B1 395 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 TNFRSF12AQ9NP84 129 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 EXOSC3Q9NQT5 275 aaKnown RBP12.16□□□□□ -0.46
HDAC6-206ENST00000426196 EXD2Q9NVH0 621 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 ATAD3AQ9NVI7 634 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 OSGIN1Q9UJX0 560 aa12.16□□□□□ -0.46
HDAC6-206ENST00000426196 ZC3H12DA2A288 527 aaKnown RBP12.15□□□□□ -0.46
HDAC6-206ENST00000426196 CFLARO15519 480 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 BCAS1O75363 584 aaPredicted RBP12.15□□□□□ -0.46
HDAC6-206ENST00000426196 UPK3AO75631 287 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 RP2O75695 350 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 ALX3O95076 343 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 FSHBP01225 129 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 MYL2P10916 166 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 LAMP1P11279 417 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 BCKDHAP12694 445 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 MATN1P21941 496 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 CAPZA2P47755 286 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 SEC24CP53992 1094 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 RPS23P62266 143 aaKnown RBP12.15□□□□□ -0.46
HDAC6-206ENST00000426196 CEACAM7Q14002 265 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 MAPK14Q16539 360 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 GALNTL6Q49A17 601 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 LIPMQ5VYY2 423 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 DOK3Q7L591 496 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 OLIG3Q7RTU3 272 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 MDP1Q86V88 176 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 CCDC36Q8IYA8 594 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 OR2T11Q8NH01 316 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 SLC25A28Q96A46 364 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 LRRC58Q96CX6 371 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 GPA33Q99795 319 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 LINC00470Q9BZP3 86 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 ZDHHC18Q9NUE0 388 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 ZNF346Q9UL40 294 aaKnown RBP12.15□□□□□ -0.46
HDAC6-206ENST00000426196 WDR45Q9Y484 360 aa12.15□□□□□ -0.46
HDAC6-206ENST00000426196 LIPT2A6NK58 231 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 TMEM114B3SHH9 223 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 NCR1O76036 304 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 VAMP5O95183 116 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 RNASE1P07998 156 aaKnown RBP12.14□□□□□ -0.47
HDAC6-206ENST00000426196 TACR3P29371 465 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 ARF1P84077 181 aaKnown RBP12.14□□□□□ -0.47
HDAC6-206ENST00000426196 MVKQ03426 396 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 BAMBIQ13145 260 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 MAD2L1BPQ15013 274 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-206ENST00000426196 MSMPQ1L6U9 139 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 AVPI1Q5T686 147 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 TIFABQ6ZNK6 161 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 CREB3L2Q70SY1 520 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 RELL1Q8IUW5 271 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 ANKK1Q8NFD2 765 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 SLC35G5Q96KT7 338 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 TAPBPLQ9BX59 468 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 POLE3Q9NRF9 147 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.14□□□□□ -0.47
HDAC6-206ENST00000426196 OPN4Q9UHM6 478 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 ZDHHC2Q9UIJ5 367 aa12.14□□□□□ -0.47
HDAC6-206ENST00000426196 A0A1W2PPW3 197 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 LSM1O15116 133 aaKnown RBP12.13□□□□□ -0.47
HDAC6-206ENST00000426196 SCN2BO60939 215 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 DEAF1O75398 565 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-206ENST00000426196 AGR2O95994 175 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 CHEK2O96017 543 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 IGHV2-5P01817 119 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 NAT2P11245 290 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 MAPK1P28482 360 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 GLRXP35754 106 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 ETF1P62495 437 aaKnown RBP12.13□□□□□ -0.47
HDAC6-206ENST00000426196 KCNJ10P78508 379 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 TRMT5Q32P41 509 aaKnown RBP12.13□□□□□ -0.47
HDAC6-206ENST00000426196 MMEL1Q495T6 779 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 ATAD3BQ5T9A4 648 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 GKAP1Q5VSY0 366 aaPredicted RBP12.13□□□□□ -0.47
HDAC6-206ENST00000426196 RAB8BQ92930 207 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 PRPF18Q99633 342 aaKnown RBP12.13□□□□□ -0.47
HDAC6-206ENST00000426196 MMP27Q9H306 513 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 ADPRHL2Q9NX46 363 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 FIS1Q9Y3D6 152 aa12.13□□□□□ -0.47
HDAC6-206ENST00000426196 EXOC1LA0A1B0GW35 172 aa12.12□□□□□ -0.47
HDAC6-206ENST00000426196 ZNF503-AS2A6NEH8 195 aa12.12□□□□□ -0.47
HDAC6-206ENST00000426196 TMEM229AB2RXF0 380 aa12.12□□□□□ -0.47
HDAC6-206ENST00000426196 RPL36A-HNRNPH2H7BZ11 118 aa12.12□□□□□ -0.47
HDAC6-206ENST00000426196 AP3D1O14617 1153 aa12.12□□□□□ -0.47
HDAC6-206ENST00000426196 AZIN1O14977 448 aa12.12□□□□□ -0.47
HDAC6-206ENST00000426196 CDC14BO60729 498 aa12.12□□□□□ -0.47
HDAC6-206ENST00000426196 ZNF432O94892 652 aa12.12□□□□□ -0.47
HDAC6-206ENST00000426196 GUSBP08236 651 aa12.12□□□□□ -0.47
HDAC6-206ENST00000426196 LINC00032P0C843 101 aa12.12□□□□□ -0.47
HDAC6-206ENST00000426196 UQCRBP14927 111 aa12.12□□□□□ -0.47
HDAC6-206ENST00000426196 MDKP21741 143 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-206ENST00000426196 RAD52P43351 418 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms