RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 BTLAQ7Z6A9 289 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 SPATA24Q86W54 205 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 ZNF347Q96SE7 839 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 C20orf141Q9NUB4 165 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 EMC9Q9Y3B6 208 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 MED31Q9Y3C7 131 aa21.79■■□□□ 1.08
VEGFA-209ENST00000425836 IGKV3D-15A0A087WSY6 115 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 NKX2-6A6NCS4 301 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 M0R082 166 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 MT-ATP6P00846 226 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 SLC16A1P53985 500 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 SLC17A1Q14916 467 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 TMEM201Q5SNT2 666 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 ZNF417Q8TAU3 575 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 CANT1Q8WVQ1 401 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 ZNF775Q96BV0 537 aaPredicted RBP21.78■■□□□ 1.08
VEGFA-209ENST00000425836 ZNF587Q96SQ5 575 aaPredicted RBP21.78■■□□□ 1.08
VEGFA-209ENST00000425836 KLHL4Q9C0H6 718 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 TESMINQ9Y4I5 508 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 CORINQ9Y5Q5 1042 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 ARHGAP21Q5T5U3 1957 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 A0A087WUU8 490 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 TCRBV3S1A0A5B6 114 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 DHRS12A0PJE2 317 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 ENO4A6NNW6 628 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 ZNF724A8MTY0 619 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 PIP5K1CO60331 668 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 CGAP01215 116 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 IGF2P01344 180 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 UMPSP11172 480 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 TMEM225Q6GV28 225 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 TBPL2Q6SJ96 375 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 H1FNTQ75WM6 255 aaPredicted RBP21.78■■□□□ 1.08
VEGFA-209ENST00000425836 OR6K3Q8NGY3 331 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 OR52J3Q8NH60 311 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 SLC7A13Q8TCU3 470 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 ACOT11Q8WXI4 607 aaPredicted RBP21.78■■□□□ 1.08
VEGFA-209ENST00000425836 TACO1Q9BSH4 297 aaKnown RBP21.78■■□□□ 1.08
VEGFA-209ENST00000425836 PIGMQ9H3S5 423 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 CHST11Q9NPF2 352 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 KCNJ16Q9NPI9 418 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 JKAMPQ9P055 326 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 C6orf203Q9P0P8 240 aaPredicted RBP21.78■■□□□ 1.08
VEGFA-209ENST00000425836 B3GALT5Q9Y2C3 310 aa21.78■■□□□ 1.08
VEGFA-209ENST00000425836 RAP2AP10114 183 aa21.77■■□□□ 1.08
VEGFA-209ENST00000425836 ERFP50548 548 aa21.77■■□□□ 1.08
VEGFA-209ENST00000425836 SPIBQ01892 262 aa21.77■■□□□ 1.08
VEGFA-209ENST00000425836 PODNL1Q6PEZ8 512 aa21.77■■□□□ 1.08
VEGFA-209ENST00000425836 ZNF730Q6ZMV8 503 aa21.77■■□□□ 1.08
VEGFA-209ENST00000425836 MAMDC2Q7Z304 686 aaPredicted RBP21.77■■□□□ 1.08
VEGFA-209ENST00000425836 SLC46A3Q7Z3Q1 461 aa21.77■■□□□ 1.08
VEGFA-209ENST00000425836 NUFIP2Q7Z417 695 aaKnown RBP21.77■■□□□ 1.08
VEGFA-209ENST00000425836 YTHDF3Q7Z739 585 aaKnown RBP21.77■■□□□ 1.08
VEGFA-209ENST00000425836 SCAIQ8N9R8 606 aa21.77■■□□□ 1.08
VEGFA-209ENST00000425836 PSMG3-AS1Q96PY0 264 aa21.77■■□□□ 1.08
VEGFA-209ENST00000425836 SF3B5Q9BWJ5 86 aaKnown RBP21.77■■□□□ 1.08
VEGFA-209ENST00000425836 ASPNQ9BXN1 380 aa21.77■■□□□ 1.08
VEGFA-209ENST00000425836 FKRPQ9H9S5 495 aa21.77■■□□□ 1.08
VEGFA-209ENST00000425836 AURKCQ9UQB9 309 aa21.77■■□□□ 1.08
VEGFA-209ENST00000425836 RASD1Q9Y272 281 aa21.77■■□□□ 1.08
VEGFA-209ENST00000425836 VAMP5O95183 116 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 CLDN1O95832 211 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 SMIM11AP58511 58 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 FGD3Q5JSP0 725 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 C1orf146Q5VVC0 180 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 NRMQ8IXM6 262 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 RNF113BQ8IZP6 322 aaKnown RBP21.76■■□□□ 1.07
VEGFA-209ENST00000425836 KDM8Q8N371 416 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 LRRC17Q8N6Y2 441 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 SGTBQ96EQ0 304 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 DOCK7Q96N67 2140 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 FUZQ9BT04 418 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 CHID1Q9BWS9 393 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 NANSQ9NR45 359 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 PLSCR4Q9NRQ2 329 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 MRPL39Q9NYK5 338 aaKnown RBP21.76■■□□□ 1.07
VEGFA-209ENST00000425836 EMC3Q9P0I2 261 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 ZNF229Q9UJW7 825 aa21.76■■□□□ 1.07
VEGFA-209ENST00000425836 PCNX1Q96RV3 2341 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 TRBV4-1A0A0J9YWV2 114 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 A1L4Q6 167 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 EEF1E1-BLOC1S5C9J1V9 151 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 GPR171O14626 319 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 EEF1E1O43324 174 aaKnown RBP21.75■■□□□ 1.07
VEGFA-209ENST00000425836 SMNDC1O75940 238 aaKnown RBP eCLIP21.75■■□□□ 1.074e-7■■□□□ 12.8
VEGFA-209ENST00000425836 RRM2P31350 389 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 TFF3Q07654 80 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 MBOAT2Q6ZWT7 520 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 GPAT4Q86UL3 456 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 ADPRHL1Q8NDY3 354 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 OR9K2Q8NGE7 335 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 OR5J2Q8NH18 312 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 OPN3Q9H1Y3 402 aaPredicted RBP21.75■■□□□ 1.07
VEGFA-209ENST00000425836 C12orf49Q9H741 205 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 PROCRQ9UNN8 238 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 FLVCR1Q9Y5Y0 555 aa21.75■■□□□ 1.07
VEGFA-209ENST00000425836 MS4A18H0YCH9 400 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 OR7A10O76100 309 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 GADD45GO95257 159 aa21.74■■□□□ 1.07
VEGFA-209ENST00000425836 ASAH2BP0C7U1 165 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms