RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CDH15P55291 814 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 IL1RL1Q01638 556 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ADIPOQQ15848 244 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CREB3L2Q70SY1 520 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ANKRD46Q86W74 232 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 C3orf56Q8N813 242 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SGMS2Q8NHU3 365 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 TCP10LQ8TDR4 215 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 MECRQ9BV79 373 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ROPN1BQ9BZX4 212 aaPredicted RBP10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SERHL2Q9H4I8 314 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ROPN1Q9HAT0 212 aaPredicted RBP10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 B3GAT2Q9NPZ5 323 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 THUMPD1Q9NXG2 353 aaKnown RBP10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 BTNL2Q9UIR0 455 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 GPR160Q9UJ42 338 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 USP22Q9UPT9 525 aa10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.67□□□□□ -0.7
HLA-DQB3-203ENST00000425319 LRP5LA4QPB2 252 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 TRIM77I1YAP6 450 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SPRY1O43609 319 aaPredicted RBP10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 OR2T1O43869 369 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ENTPD5O75356 428 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SPAG7O75391 227 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ANP32DO95626 131 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CHRM4P08173 479 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 TACSTD2P09758 323 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ACTG1P63261 375 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ROR2Q01974 943 aaKnown RBP10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 EPS8Q12929 822 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 DAG1Q14118 895 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 PDCD2Q16342 344 aaPredicted RBP10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 TRMT5Q32P41 509 aaKnown RBP10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 LIN52Q52LA3 116 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 PDCD4Q53EL6 469 aaKnown RBP10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 C5orf46Q6UWT4 87 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 OLIG3Q7RTU3 272 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 MEX3DQ86XN8 651 aaKnown RBP10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 TREML1Q86YW5 311 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 LRRC34Q8IZ02 419 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 PIK3C3Q8NEB9 887 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 OR52P1PQ8NH57 321 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 STK35Q8TDR2 534 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CKAP2Q8WWK9 683 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 BCL2L2Q92843 193 aaPredicted RBP10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 GCDHQ92947 438 aaPredicted RBP10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SLC25A36Q96CQ1 311 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ZG16BQ96DA0 208 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ZNF385AQ96PM9 386 aaKnown RBP10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SNX18Q96RF0 628 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CRLF2Q9HC73 371 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SELENONQ9NZV5 590 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CRNNQ9UBG3 495 aaPredicted RBP10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 IFT52Q9Y366 437 aa10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SONP18583 2426 aaKnown RBP10.66□□□□□ -0.7
HLA-DQB3-203ENST00000425319 STAB1Q9NY15 2570 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 A0A096LPE4 126 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CENPVL1A0A0U1RR11 272 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 A0A1W2PPZ6 126 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CCDC154A6NI56 674 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 E9PBE3 544 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 HMGN4O00479 90 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 AP3D1O14617 1153 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 BPGMP07738 259 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CECR9P0C854 216 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CREB1P16220 341 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ITGA2P17301 1181 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 THBS4P35443 961 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 GPR6P46095 362 aaPredicted RBP10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 EVX1P49640 407 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 RPL14P50914 215 aaKnown RBP10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CRISP3P54108 245 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CLDN17P56750 224 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 RPS23P62266 143 aaKnown RBP10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SLC25A3Q00325 362 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SRSF2Q01130 221 aaKnown RBP10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 GALK2Q01415 458 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 NPRL3Q12980 569 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CASP8Q14790 479 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SYPL1Q16563 259 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SLC9B1Q4ZJI4 515 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 MRPL2Q5T653 305 aaKnown RBP10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 GKAP1Q5VSY0 366 aaPredicted RBP10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 C1orf140Q5VVS0 124 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 NET1Q7Z628 596 aaPredicted RBP10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 RNF130Q86XS8 419 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 ZIC4Q8N9L1 334 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 MFSD8Q8NHS3 518 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 PPP1R36Q96LQ0 422 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 OR52E6Q96RD3 313 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 DOK1Q99704 481 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 METTL17Q9H7H0 456 aaPredicted RBP10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 AKTIPQ9H8T0 292 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 SLC17A7Q9P2U7 560 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 P2RX2Q9UBL9 471 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 FBXL3Q9UKT7 428 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 RCE1Q9Y256 329 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 RAP2CQ9Y3L5 183 aa10.65□□□□□ -0.7
HLA-DQB3-203ENST00000425319 CR1P17927 2039 aa10.65□□□□□ -0.71
HLA-DQB3-203ENST00000425319 CLDN24A6NM45 220 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms