RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 COPS7AQ9UBW8 275 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 TBC1D24Q9ULP9 559 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 GSTK1Q9Y2Q3 226 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 SLC6A5Q9Y345 797 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 CMAHPQ9Y471 501 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 MMACHCQ9Y4U1 282 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 KNTC1P50748 2209 aa8.01□□□□□ -1.13
SNCA-206ENST00000420646 A0A1B0GTH9 108 aa8□□□□□ -1.13
SNCA-206ENST00000420646 IRGMA1A4Y4 181 aa8□□□□□ -1.13
SNCA-206ENST00000420646 FABP12A6NFH5 140 aa8□□□□□ -1.13
SNCA-206ENST00000420646 FRG2CA6NGY1 282 aa8□□□□□ -1.13
SNCA-206ENST00000420646 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8□□□□□ -1.13
SNCA-206ENST00000420646 OR7A10O76100 309 aa8□□□□□ -1.13
SNCA-206ENST00000420646 IL1AP01583 271 aa8□□□□□ -1.13
SNCA-206ENST00000420646 SLC2A2P11168 524 aaPredicted RBP8□□□□□ -1.13
SNCA-206ENST00000420646 SDHBP21912 280 aa8□□□□□ -1.13
SNCA-206ENST00000420646 CD200R1LQ6Q8B3 271 aa8□□□□□ -1.13
SNCA-206ENST00000420646 CCBE1Q6UXH8 406 aaPredicted RBP8□□□□□ -1.13
SNCA-206ENST00000420646 NRARPQ7Z6K4 114 aa8□□□□□ -1.13
SNCA-206ENST00000420646 FAM71CQ8NEG0 241 aa8□□□□□ -1.13
SNCA-206ENST00000420646 OR52N1Q8NH53 320 aa8□□□□□ -1.13
SNCA-206ENST00000420646 GPR119Q8TDV5 335 aa8□□□□□ -1.13
SNCA-206ENST00000420646 GHSRQ92847 366 aa8□□□□□ -1.13
SNCA-206ENST00000420646 HPS1Q92902 700 aa8□□□□□ -1.13
SNCA-206ENST00000420646 DAZLQ92904 295 aaKnown RBP8□□□□□ -1.13
SNCA-206ENST00000420646 CCDC74BQ96LY2 380 aa8□□□□□ -1.13
SNCA-206ENST00000420646 MMP25Q9NPA2 562 aa8□□□□□ -1.13
SNCA-206ENST00000420646 CRNNQ9UBG3 495 aaPredicted RBP8□□□□□ -1.13
SNCA-206ENST00000420646 GNG8Q9UK08 70 aa8□□□□□ -1.13
SNCA-206ENST00000420646 PILRBQ9UKJ0 227 aa8□□□□□ -1.13
SNCA-206ENST00000420646 ICAM5Q9UMF0 924 aa8□□□□□ -1.13
SNCA-206ENST00000420646 A3GALT2U3KPV4 340 aa8□□□□□ -1.13
SNCA-206ENST00000420646 A0A075B6Q4 140 aa8□□□□□ -1.13
SNCA-206ENST00000420646 TRDV1A0A1B0GX56 115 aa8□□□□□ -1.13
SNCA-206ENST00000420646 TFECO14948 347 aaPredicted RBP8□□□□□ -1.13
SNCA-206ENST00000420646 RPP14O95059 124 aaKnown RBP8□□□□□ -1.13
SNCA-206ENST00000420646 HLA-DPB1P04440 258 aa8□□□□□ -1.13
SNCA-206ENST00000420646 SPI1P17947 270 aa8□□□□□ -1.13
SNCA-206ENST00000420646 IL11P20809 199 aa8□□□□□ -1.13
SNCA-206ENST00000420646 GRK6P43250 576 aa8□□□□□ -1.13
SNCA-206ENST00000420646 FOXK1P85037 733 aa8□□□□□ -1.13
SNCA-206ENST00000420646 RPL18Q07020 188 aaKnown RBP8□□□□□ -1.13
SNCA-206ENST00000420646 ODF4Q2M2E3 257 aa8□□□□□ -1.13
SNCA-206ENST00000420646 ALG10Q5BKT4 473 aa8□□□□□ -1.13
SNCA-206ENST00000420646 IDNKQ5T6J7 187 aa8□□□□□ -1.13
SNCA-206ENST00000420646 PMS2CLQ68D20 193 aa8□□□□□ -1.13
SNCA-206ENST00000420646 TCEAL6Q6IPX3 200 aa8□□□□□ -1.13
SNCA-206ENST00000420646 ARHGAP11AQ6P4F7 1023 aa8□□□□□ -1.13
SNCA-206ENST00000420646 KANSL1Q7Z3B3 1105 aa8□□□□□ -1.13
SNCA-206ENST00000420646 CEACAM19Q7Z692 300 aa8□□□□□ -1.13
SNCA-206ENST00000420646 TCEAL3Q969E4 200 aa8□□□□□ -1.13
SNCA-206ENST00000420646 MVB12AQ96EY5 273 aa8□□□□□ -1.13
SNCA-206ENST00000420646 CHRNA10Q9GZZ6 450 aa8□□□□□ -1.13
SNCA-206ENST00000420646 NRIP3Q9NQ35 241 aa8□□□□□ -1.13
SNCA-206ENST00000420646 VDAC3Q9Y277 283 aa8□□□□□ -1.13
SNCA-206ENST00000420646 ZNF337Q9Y3M9 751 aa8□□□□□ -1.13
SNCA-206ENST00000420646 SPENQ96T58 3664 aaKnown RBP8□□□□□ -1.13
SNCA-206ENST00000420646 RTTNQ86VV8 2226 aa8□□□□□ -1.13
SNCA-206ENST00000420646 A0A1B0GTQ1 180 aa8□□□□□ -1.13
SNCA-206ENST00000420646 A0A1W2PQ09 198 aa8□□□□□ -1.13
SNCA-206ENST00000420646 BLACEA4D250 179 aa8□□□□□ -1.13
SNCA-206ENST00000420646 TMCC2O75069 709 aa8□□□□□ -1.13
SNCA-206ENST00000420646 IFNGP01579 166 aa8□□□□□ -1.13
SNCA-206ENST00000420646 IFI6P09912 130 aa8□□□□□ -1.13
SNCA-206ENST00000420646 ZNF28P17035 718 aa8□□□□□ -1.13
SNCA-206ENST00000420646 PSMD4P55036 377 aaKnown RBP8□□□□□ -1.13
SNCA-206ENST00000420646 CLDN6P56747 220 aa8□□□□□ -1.13
SNCA-206ENST00000420646 RNF4P78317 190 aa8□□□□□ -1.13
SNCA-206ENST00000420646 RPL13AP3Q6NVV1 102 aa8□□□□□ -1.13
SNCA-206ENST00000420646 VASH1Q7L8A9 365 aaPredicted RBP8□□□□□ -1.13
SNCA-206ENST00000420646 SLC29A4Q7RTT9 530 aa8□□□□□ -1.13
SNCA-206ENST00000420646 GLCCI1Q86VQ1 547 aa8□□□□□ -1.13
SNCA-206ENST00000420646 CMIPQ8IY22 773 aa8□□□□□ -1.13
SNCA-206ENST00000420646 MAML2Q8IZL2 1156 aaPredicted RBP8□□□□□ -1.13
SNCA-206ENST00000420646 ZBTB8BQ8NAP8 495 aaPredicted RBP8□□□□□ -1.13
SNCA-206ENST00000420646 APCDD1LQ8NCL9 501 aa8□□□□□ -1.13
SNCA-206ENST00000420646 LSM14AQ8ND56 463 aaKnown RBP8□□□□□ -1.13
SNCA-206ENST00000420646 PELI1Q96FA3 418 aa8□□□□□ -1.13
SNCA-206ENST00000420646 PAIP2BQ9ULR5 123 aaKnown RBP8□□□□□ -1.13
SNCA-206ENST00000420646 KLHDC2Q9Y2U9 406 aa8□□□□□ -1.13
SNCA-206ENST00000420646 TMEM221A6NGB7 291 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 TSPAN2O60636 221 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 ALOX12BO75342 701 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 MT-ND5P03915 603 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 HEXBP07686 556 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 CELA2AP08217 269 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 FGF9P31371 208 aaPredicted RBP7.99□□□□□ -1.13
SNCA-206ENST00000420646 PON3Q15166 354 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 ZNF181Q2M3W8 571 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 SLC25A35Q3KQZ1 300 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 RHBDD2Q6NTF9 364 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 PRSS42Q7Z5A4 293 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 ATF6BQ99941 703 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 B3GAT2Q9NPZ5 323 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 TRIM36Q9NQ86 728 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 INIPQ9NRY2 104 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 TBCCD1Q9NVR7 557 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 CPNE3O75131 537 aaKnown RBP7.99□□□□□ -1.13
SNCA-206ENST00000420646 IL7P13232 177 aa7.99□□□□□ -1.13
SNCA-206ENST00000420646 CCL4P13236 92 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms