RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 RLIMQ9NVW2 624 aa12.29□□□□□ -0.44
NFE4-201ENST00000420058 VWFP04275 2813 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 SH3PXD2BA1X283 911 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 TMEM89A2RUT3 159 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 CFAP73A6NFT4 308 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 FAM157AC9JC47 383 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 ZNF587BE7ETH6 402 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 WNT9BO14905 357 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 NPIPB7O75200 414 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 ADRA2AP08913 450 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 HOXB1P14653 301 aaPredicted RBP12.28□□□□□ -0.44
NFE4-201ENST00000420058 IFNGR1P15260 489 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 PAX7P23759 505 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 UBE2NP61088 152 aaKnown RBP12.28□□□□□ -0.44
NFE4-201ENST00000420058 CCNIQ14094 377 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 ADRM1Q16186 407 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 GPAT3Q53EU6 434 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 ELFN2Q5R3F8 820 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 TMEM225Q6GV28 225 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 C1orf229Q6ZS94 237 aaPredicted RBP12.28□□□□□ -0.44
NFE4-201ENST00000420058 SPATA21Q7Z572 469 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 ABHD12BQ7Z5M8 362 aaPredicted RBP12.28□□□□□ -0.44
NFE4-201ENST00000420058 GPAT4Q86UL3 456 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 WDR60Q8WVS4 1066 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 ZNF317Q96PQ6 595 aaPredicted RBP12.28□□□□□ -0.44
NFE4-201ENST00000420058 TRNT1Q96Q11 434 aaKnown RBP12.28□□□□□ -0.44
NFE4-201ENST00000420058 KCNS3Q9BQ31 491 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 LINC00470Q9BZP3 86 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 AKTIPQ9H8T0 292 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 SPEF1Q9Y4P9 236 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 WNK2Q9Y3S1 2297 aa12.28□□□□□ -0.44
NFE4-201ENST00000420058 B4DSR2 109 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 RPL36A-HNRNPH2H7BZ11 118 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 SNUPNO95149 360 aaKnown RBP12.27□□□□□ -0.45
NFE4-201ENST00000420058 GKN3PP0CG01 181 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 COL8A2P25067 703 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 ARF1P84077 181 aaKnown RBP12.27□□□□□ -0.45
NFE4-201ENST00000420058 GSTA3Q16772 222 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 SMU1Q2TAY7 513 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 MRPL2Q5T653 305 aaKnown RBP12.27□□□□□ -0.45
NFE4-201ENST00000420058 LRRC74BQ6ZQY2 392 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 RNF130Q86XS8 419 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 KDM8Q8N371 416 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 CKAP2Q8WWK9 683 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 APOPT1Q96IL0 206 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 RHOXF2Q9BQY4 288 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 MTHFD2LQ9H903 347 aaPredicted RBP12.27□□□□□ -0.45
NFE4-201ENST00000420058 NOP53Q9NZM5 478 aaKnown RBP12.27□□□□□ -0.45
NFE4-201ENST00000420058 MARCOQ9UEW3 520 aaPredicted RBP12.27□□□□□ -0.45
NFE4-201ENST00000420058 FBXO9Q9UK97 447 aaPredicted RBP12.27□□□□□ -0.45
NFE4-201ENST00000420058 CHST2Q9Y4C5 530 aa12.27□□□□□ -0.45
NFE4-201ENST00000420058 FTCDNL1E5RQL4 147 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 FRS3O43559 492 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 KRT33AO76009 404 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 VAMP5O95183 116 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 AVPP01185 164 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 CXCR1P25024 350 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 SERPINB5P36952 375 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 ROR2Q01974 943 aaKnown RBP12.26□□□□□ -0.45
NFE4-201ENST00000420058 POU3F1Q03052 451 aaPredicted RBP12.26□□□□□ -0.45
NFE4-201ENST00000420058 MAD2L1Q13257 205 aaPredicted RBP12.26□□□□□ -0.45
NFE4-201ENST00000420058 COX20Q5RI15 118 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 NIPAL3Q6P499 406 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 CLDND2Q8NHS1 167 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 TCP10LQ8TDR4 215 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 ANP32BQ92688 251 aaKnown RBP12.26□□□□□ -0.45
NFE4-201ENST00000420058 TESCQ96BS2 214 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 TEX37Q96LM6 180 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 ZNF75AQ96N20 296 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 ANKRD27Q96NW4 1050 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 SLC35A5Q9BS91 424 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 TPK1Q9H3S4 243 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 PPCSQ9HAB8 311 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 HIF1ANQ9NWT6 349 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 ADPRHL2Q9NX46 363 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 B3GNT2Q9NY97 397 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 PCDHB14Q9Y5E9 798 aa12.26□□□□□ -0.45
NFE4-201ENST00000420058 CDHR4A6H8M9 788 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 OR6C65A6NJZ3 312 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 A8MVM7 634 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 ITM2AO43736 263 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 SPAG7O75391 227 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 HPXP02790 462 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 TFPTP0C1Z6 253 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 PRG2P13727 222 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 CREB1P16220 341 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 NR4A1P22736 598 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 ARFIP2P53365 341 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 LMO4P61968 165 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 SPANXN4Q5MJ08 99 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 ANXA8L1Q5VT79 327 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 C1orf140Q5VVS0 124 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 UGT2A3Q6UWM9 527 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 CLIP4Q8N3C7 705 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 ANKK1Q8NFD2 765 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 SGMS2Q8NHU3 365 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 FAM216AQ8WUB2 273 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 TMEM186Q96B77 213 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 CCDC115Q96NT0 180 aa12.25□□□□□ -0.45
NFE4-201ENST00000420058 PTDSS2Q9BVG9 487 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms