RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 CDC42EP3Q9UKI2 254 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 RAB21Q9UL25 225 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 ZNF232Q9UNY5 417 aa15.1■□□□□ 0.01
PTCD1-202ENST00000419981 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.09■□□□□ 0.01
PTCD1-202ENST00000419981 KLF11O14901 512 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 TFPTP0C1Z6 253 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 PRG2P13727 222 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 SELENOPP49908 381 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 TBRG1Q3YBR2 411 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 GTDC1Q4AE62 458 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 CREB3L2Q70SY1 520 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 CLIP4Q8N3C7 705 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 OR1K1Q8NGR3 316 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 PROX1Q92786 737 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 FBXO17Q96EF6 278 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 ITCHQ96J02 903 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 MAELQ96JY0 434 aaKnown RBP15.09■□□□□ 0.01
PTCD1-202ENST00000419981 SLC38A2Q96QD8 506 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 SPATA9Q9BWV2 254 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 ZIM2Q9NZV7 527 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 IFT52Q9Y366 437 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 FKBP7Q9Y680 259 aa15.09■□□□□ 0.01
PTCD1-202ENST00000419981 IGHV1-18A0A0C4DH31 117 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 A0A0G2JPF8 293 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 OR6C65A6NJZ3 312 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 TMEM229AB2RXF0 380 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 HNRNPCL2B2RXH8 293 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 HNRNPCL3B7ZW38 293 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 HNRNPCL1O60812 293 aaKnown RBP15.08■□□□□ 0
PTCD1-202ENST00000419981 LY6HO94772 140 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 AHSA1O95433 338 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 LGI1O95970 557 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 F12P00748 615 aaPredicted RBP15.08■□□□□ 0
PTCD1-202ENST00000419981 FAM157CP0CG43 387 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 HNRNPCL4P0DMR1 293 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 PAX7P23759 505 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 UBE2NP61088 152 aaKnown RBP15.08■□□□□ 0
PTCD1-202ENST00000419981 SNRPD2P62316 118 aaKnown RBP15.08■□□□□ 0
PTCD1-202ENST00000419981 LGALS3BPQ08380 585 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 SLC9B1Q4ZJI4 515 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 C6orf10Q5SRN2 563 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 CYB5R2Q6BCY4 276 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 NIPAL3Q6P499 406 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 SERPINA11Q86U17 422 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 STK35Q8TDR2 534 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 NANOS1Q8WY41 292 aaKnown RBP15.08■□□□□ 0
PTCD1-202ENST00000419981 C3orf49Q96BT1 292 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 KCNK17Q96T54 332 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 SDR39U1Q9NRG7 319 aaPredicted RBP15.08■□□□□ 0
PTCD1-202ENST00000419981 TMEM160Q9NX00 188 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 RASD1Q9Y272 281 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 CHST2Q9Y4C5 530 aa15.08■□□□□ 0
PTCD1-202ENST00000419981 NPIPB7O75200 414 aa15.07■□□□□ 0
PTCD1-202ENST00000419981 ZNF16P17020 682 aaPredicted RBP15.07■□□□□ 0
PTCD1-202ENST00000419981 USF1P22415 310 aaPredicted RBP15.07■□□□□ 0
PTCD1-202ENST00000419981 GTF2E2P29084 291 aaKnown RBP15.07■□□□□ 0
PTCD1-202ENST00000419981 POLR2JP52435 117 aaKnown RBP15.07■□□□□ 0
PTCD1-202ENST00000419981 SWI5Q1ZZU3 235 aa15.07■□□□□ 0
PTCD1-202ENST00000419981 MST1LQ2TV78 715 aa15.07■□□□□ 0
PTCD1-202ENST00000419981 ZNF311Q5JNZ3 666 aa15.07■□□□□ 0
PTCD1-202ENST00000419981 EPHX4Q8IUS5 362 aa15.07■□□□□ 0
PTCD1-202ENST00000419981 OR9I1Q8NGQ6 314 aa15.07■□□□□ 0
PTCD1-202ENST00000419981 VPS33AQ96AX1 596 aa15.07■□□□□ 0
PTCD1-202ENST00000419981 SORCS2Q96PQ0 1159 aa15.07■□□□□ 0
PTCD1-202ENST00000419981 KATNB1Q9BVA0 655 aa15.07■□□□□ 0
PTCD1-202ENST00000419981 FBN3Q75N90 2809 aa15.07■□□□□ 0
PTCD1-202ENST00000419981 ARPC4-TTLL3A0A0A6YYG9 625 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 UBDO15205 165 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 CRYAAP02489 173 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 IGHV4-31P0DP07 118 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 PDLIM4P50479 330 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 SH3BGRP55822 239 aaPredicted RBP15.06■□□□□ 0
PTCD1-202ENST00000419981 LSM11P83369 360 aaKnown RBP eCLIP15.06■□□□□ 0
PTCD1-202ENST00000419981 LINGO2Q7L985 606 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 PHC2Q8IXK0 858 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 MFSD8Q8NHS3 518 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 TMEM158Q8WZ71 300 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 BCL2L2Q92843 193 aaPredicted RBP15.06■□□□□ 0
PTCD1-202ENST00000419981 SLC25A36Q96CQ1 311 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 ZNF317Q96PQ6 595 aaPredicted RBP15.06■□□□□ 0
PTCD1-202ENST00000419981 PIMREGQ9BSJ6 248 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 BEX2Q9BXY8 128 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 LINC00470Q9BZP3 86 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 RAD21L1Q9H4I0 556 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 CA10Q9NS85 328 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 NKIRAS1Q9NYS0 192 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 LPAR3Q9UBY5 353 aa15.06■□□□□ 0
PTCD1-202ENST00000419981 FTCDNL1E5RQL4 147 aa15.05■□□□□ -0
PTCD1-202ENST00000419981 NDUFS8O00217 210 aa15.05■□□□□ -0
PTCD1-202ENST00000419981 UPK3AO75631 287 aa15.05■□□□□ -0
PTCD1-202ENST00000419981 PDE5AO76074 875 aa15.05■□□□□ -0
PTCD1-202ENST00000419981 PNMTP11086 282 aa15.05■□□□□ -0
PTCD1-202ENST00000419981 SERPINF1P36955 418 aa15.05■□□□□ -0
PTCD1-202ENST00000419981 RPS5P46782 204 aaKnown RBP15.05■□□□□ -0
PTCD1-202ENST00000419981 SLC18A1P54219 525 aa15.05■□□□□ -0
PTCD1-202ENST00000419981 TUBA1BP68363 451 aa15.05■□□□□ -0
PTCD1-202ENST00000419981 TUBA4AP68366 448 aa15.05■□□□□ -0
PTCD1-202ENST00000419981 ROR2Q01974 943 aaKnown RBP15.05■□□□□ -0
PTCD1-202ENST00000419981 NAAAQ02083 359 aa15.05■□□□□ -0
PTCD1-202ENST00000419981 FADDQ13158 208 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms