RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 ADAMTSL2Q86TH1 951 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SYVN1Q86TM6 617 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 CALHM3Q86XJ0 350 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 RNF130Q86XS8 419 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 ZDHHC21Q8IVQ6 265 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 UBQLNLQ8IYU4 475 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TCTE3Q8IZS6 198 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SLC7A5P1Q8MH63 180 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 UMODL1-AS1Q8N2C9 162 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 STK40Q8N2I9 435 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 METTL4Q8N3J2 472 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 RAB42Q8N4Z0 105 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TEX26Q8N6G2 289 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 RTL3Q8N8U3 475 aaKnown RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 TTC29Q8NA56 475 aaPredicted RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 SPERTQ8NA61 448 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 DENND6BQ8NEG7 585 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 Q8NFD4 153 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 GPRC5AQ8NFJ5 357 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 DBF4BQ8NFT6 615 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 OR52K2Q8NGK3 314 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 OR9Q1Q8NGQ5 310 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 OR2T29Q8NH02 315 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 OR4L1Q8NH43 312 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PPTC7Q8NI37 304 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 FBXO30Q8TB52 745 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 CNIH3Q8TBE1 160 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 FAM110BQ8TC76 370 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 BRSK1Q8TDC3 778 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 ANKRD49Q8WVL7 239 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 GTF2H4Q92759 462 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 NCLNQ969V3 563 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TADA1Q96BN2 335 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 MOCOSQ96EN8 888 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SMARCD1Q96GM5 515 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PDLIM5Q96HC4 596 aaKnown RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 PYURFQ96I23 114 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 ITCHQ96J02 903 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SERPINB11Q96P15 392 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TRNT1Q96Q11 434 aaKnown RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 DHRS9Q9BPW9 319 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 C19orf43Q9BQ61 176 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SLC30A2Q9BRI3 323 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 COPS4Q9BT78 406 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 THUMPD3Q9BV44 507 aaKnown RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 KATNB1Q9BVA0 655 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 GTPBP2Q9BX10 602 aaKnown RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 GABARAPL3Q9BY60 117 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 DPY30Q9C005 99 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 POLR1EQ9GZS1 481 aaKnown RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 SLC22A4Q9H015 551 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 P2RY12Q9H244 342 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 FN3KQ9H479 309 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 DPEP3Q9H4B8 488 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 RIBC2Q9H4K1 309 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 NIPAL2Q9H841 368 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 REEP1Q9H902 201 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 C12orf10Q9HB07 376 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 CSNK1G1Q9HCP0 422 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 IL1RAPQ9NPH3 570 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 RPRD1BQ9NQG5 326 aaKnown RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 ABCC13Q9NSE7 274 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 RBM22Q9NW64 420 aaKnown RBP eCLIP2.32□□□□□ -2.04
VPS41-206ENST00000418457 FKBP14Q9NWM8 211 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 C1orf109Q9NX04 203 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TAS2R9Q9NYW1 312 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PTTG3PQ9NZH4 202 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 CNOT2Q9NZN8 540 aaKnown RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 OR6C2Q9NZP2 312 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 COX16Q9P0S2 106 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 ERVK-18Q9QC07 812 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 OPTCQ9UBM4 332 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SPASTQ9UBP0 616 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SEC14L4Q9UDX3 406 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 SLC2A6Q9UGQ3 507 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 TRMT6Q9UJA5 497 aaKnown RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 KLHL21Q9UJP4 597 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 NUP50Q9UKX7 468 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 NEU3Q9UQ49 428 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 POFUT2Q9Y2G5 429 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 RBMX2Q9Y388 322 aaKnown RBP2.32□□□□□ -2.04
VPS41-206ENST00000418457 PYGO1Q9Y3Y4 419 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 N6AMT1Q9Y5N5 214 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 R4GN57 208 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PLXNB2O15031 1838 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PTPRDP23468 1912 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 DOCK4Q8N1I0 1966 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 NUP205Q92621 2012 aa2.32□□□□□ -2.04
VPS41-206ENST00000418457 PAPPA2Q9BXP8 1791 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 PLXNA3P51805 1871 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 MYO16Q9Y6X6 1858 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 A0A087X002 238 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 SMIM28A0A1B0GU29 152 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 IQCMA0A1B0GVH7 501 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 IRGMA1A4Y4 181 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 ARRDC5A6NEK1 342 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CCDC182A6NF36 153 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 MSGN1A6NI15 193 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 E9PAM4 449 aa2.31□□□□□ -2.04
VPS41-206ENST00000418457 CCRL2O00421 344 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms