RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 RGP1Q92546 391 aaPredicted RBP13.25□□□□□ -0.29
HDAC9-208ENST00000417496 ZNF524Q96C55 264 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 CLIP3Q96DZ5 547 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 GPR137Q96N19 417 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 OR2M2Q96R28 347 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 KLHDC3Q9BQ90 382 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 DPCDQ9BVM2 203 aaPredicted RBP13.25□□□□□ -0.29
HDAC9-208ENST00000417496 TWSG1Q9GZX9 223 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.25□□□□□ -0.29
HDAC9-208ENST00000417496 ZCCHC4Q9H5U6 513 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 HEXA-AS1Q9H8Q6 139 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 LIN7BQ9HAP6 207 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 EMC7Q9NPA0 242 aa13.25□□□□□ -0.29
HDAC9-208ENST00000417496 TDRD6O60522 2096 aaKnown RBP13.25□□□□□ -0.29
HDAC9-208ENST00000417496 H7C1C5 153 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 HOXC4P09017 264 aaPredicted RBP13.24□□□□□ -0.29
HDAC9-208ENST00000417496 CT45A8P0DMV1 189 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 CT45A9P0DMV2 189 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 AQP2P41181 271 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 SOX2P48431 317 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 ZNF81P51508 661 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 LCN6P62502 163 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 CAMK2DQ13557 499 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 ODF4Q2M2E3 257 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 CT45A2Q5DJT8 189 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 CD276Q5ZPR3 534 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 Q6ZTK2 550 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 GRAMD2AQ8IUY3 354 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 C10orf53Q8N6V4 93 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 POMGNT2Q8NAT1 580 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 DNAAF1Q8NEP3 725 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 OR11G2Q8NGC1 345 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 SMIM4Q8WVI0 70 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 SLC25A38Q96DW6 304 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 CHIAQ9BZP6 476 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 C20orf85Q9H1P6 137 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 RANBP3Q9H6Z4 567 aaPredicted RBP13.24□□□□□ -0.29
HDAC9-208ENST00000417496 PRDM9Q9NQV7 894 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 OR10H1Q9Y4A9 318 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 A0A087WUJ7 227 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 IFITM5A6NNB3 132 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 FOXS1O43638 330 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 F13BP05160 661 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 OR8G3PP0DMU2 310 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 CTHP32929 405 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 CCR4P51679 360 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 POU4F3Q15319 338 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 LEG1Q6P5S2 330 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 FBXO46Q6PJ61 603 aaPredicted RBP13.24□□□□□ -0.29
HDAC9-208ENST00000417496 BTN2A1Q7KYR7 527 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 SLITRK4Q8IW52 837 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 C16orf52Q8NHV5 167 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 RNF166Q96A37 237 aaPredicted RBP13.24□□□□□ -0.29
HDAC9-208ENST00000417496 MOGAT1Q96PD6 335 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 DDOQ99489 341 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 LMF2Q9BU23 707 aaKnown RBP13.24□□□□□ -0.29
HDAC9-208ENST00000417496 SPRTNQ9H040 489 aaPredicted RBP13.24□□□□□ -0.29
HDAC9-208ENST00000417496 SRA1Q9HD15 236 aaKnown RBP13.24□□□□□ -0.29
HDAC9-208ENST00000417496 POLE3Q9NRF9 147 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.24□□□□□ -0.29
HDAC9-208ENST00000417496 ERVK-19Q9WJR5 959 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 KLHDC2Q9Y2U9 406 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 SLCO1B1Q9Y6L6 691 aa13.24□□□□□ -0.29
HDAC9-208ENST00000417496 ARID1BQ8NFD5 2236 aaPredicted RBP13.24□□□□□ -0.29
HDAC9-208ENST00000417496 DCTN6O00399 190 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 SLC22A5O76082 557 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 VEGFCP49767 419 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 OVCH1Q7RTY7 1134 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 KANSL1Q7Z3B3 1105 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 TAF8Q7Z7C8 310 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 LUZP2Q86TE4 346 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 METTL17Q9H7H0 456 aaPredicted RBP13.23□□□□□ -0.29
HDAC9-208ENST00000417496 DLL4Q9NR61 685 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 EIF3KQ9UBQ5 218 aaKnown RBP13.23□□□□□ -0.29
HDAC9-208ENST00000417496 ELF5Q9UKW6 265 aaPredicted RBP13.23□□□□□ -0.29
HDAC9-208ENST00000417496 CFAP54Q96N23 3096 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 TMEM72A0PK05 275 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 ZNF879B4DU55 563 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 OIP5O43482 229 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 ICMTO60725 284 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 MPC2O95563 127 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 DLX2Q07687 328 aaPredicted RBP13.23□□□□□ -0.29
HDAC9-208ENST00000417496 GGTLC2Q14390 218 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 ANGPT1Q15389 498 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 UBE2NLQ5JXB2 153 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 CBLN3Q6UW01 205 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 DPY19L2P2Q6ZN68 376 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 BCORP1Q8N888 145 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 OR2T35Q8NGX2 323 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 OR2T4Q8NH00 348 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 HOXB13Q92826 284 aaPredicted RBP13.23□□□□□ -0.29
HDAC9-208ENST00000417496 C3orf49Q96BT1 292 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 ALG12Q9BV10 488 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 HRASLSQ9HDD0 168 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 MPDZO75970 2070 aa13.23□□□□□ -0.29
HDAC9-208ENST00000417496 IGKV1D-42A0A075B6H8 117 aa13.22□□□□□ -0.29
HDAC9-208ENST00000417496 CIB4A0PJX0 185 aa13.22□□□□□ -0.29
HDAC9-208ENST00000417496 NPIPB9F8W1W9 429 aa13.22□□□□□ -0.29
HDAC9-208ENST00000417496 GATBO75879 557 aaKnown RBP13.22□□□□□ -0.29
HDAC9-208ENST00000417496 CRYZL1O95825 349 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms