RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 UBQLN3Q9H347 655 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 GCM1Q9NP62 436 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 SIDT1Q9NXL6 827 aaKnown RBP11.97□□□□□ -0.49
SCN1B-202ENST00000415950 CA5BQ9Y2D0 317 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 DOPEY2Q9Y3R5 2298 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 TMEM72A0PK05 275 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 GAPDHSO14556 408 aaPredicted RBP11.97□□□□□ -0.49
SCN1B-202ENST00000415950 IFNA17P01571 189 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 TPT1P13693 172 aaKnown RBP11.97□□□□□ -0.49
SCN1B-202ENST00000415950 ANXA7P20073 488 aaKnown RBP11.97□□□□□ -0.49
SCN1B-202ENST00000415950 ERVFC1P60507 584 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 ELOCQ15369 112 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 C3orf38Q5JPI3 329 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 LYPD8Q6UX82 237 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 ZNF680Q8NEM1 530 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 STEAP2Q8NFT2 490 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 OR1J4Q8NGS1 313 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 OR56B4Q8NH76 319 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 LINC01599Q8WXQ3 324 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 MED30Q96HR3 178 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 ELF4Q99607 663 aaPredicted RBP11.97□□□□□ -0.49
SCN1B-202ENST00000415950 CHST8Q9H2A9 424 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 C11orf49Q9H6J7 331 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 UNKLQ9H9P5 680 aaKnown RBP11.97□□□□□ -0.49
SCN1B-202ENST00000415950 QPCTLQ9NXS2 382 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 A0A0B4J2A0 478 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 FAM230AA0A1W2PPH8 454 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 GGT3PA6NGU5 568 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 PEX14O75381 377 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 AIFM1O95831 613 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 C1QBP02746 253 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 DBHP09172 617 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 DEFB103AP81534 67 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 LTBQ06643 244 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 KIAA0040Q15053 153 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 FAM69AQ5T7M9 428 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 LINC00299Q6ZSB3 139 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 CREB3L2Q70SY1 520 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 TMEM99Q8N816 258 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 ZNF775Q96BV0 537 aaPredicted RBP11.97□□□□□ -0.49
SCN1B-202ENST00000415950 CDCA4Q9BXL8 241 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 SEMA4CQ9C0C4 833 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 SHPKQ9UHJ6 478 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 GPR34Q9UPC5 381 aa11.97□□□□□ -0.49
SCN1B-202ENST00000415950 HBQ1P09105 142 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 UBBP0CG47 229 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 UBCP0CG48 685 aaKnown RBP11.96□□□□□ -0.49
SCN1B-202ENST00000415950 PNMTP11086 282 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 OMGP23515 440 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 PRLHRP49683 370 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 PRPS1P60891 318 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 TIAL1Q01085 375 aaKnown RBP eCLIP11.96□□□□□ -0.49
SCN1B-202ENST00000415950 ACY1Q03154 408 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 ZNF169Q14929 603 aaPredicted RBP11.96□□□□□ -0.49
SCN1B-202ENST00000415950 OR1Q1Q15612 314 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 SSX1Q16384 188 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 CCDC190Q86UF4 302 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 ZNF695Q8IW36 515 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 FOXRED1Q96CU9 486 aaPredicted RBP11.96□□□□□ -0.49
SCN1B-202ENST00000415950 DTD2Q96FN9 168 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 NRTNQ99748 197 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 OR51B6Q9H340 312 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 NIPAL2Q9H841 368 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 SLC23A1Q9UHI7 598 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 SERPINE2P07093 398 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 HMGA1P17096 107 aaKnown RBP11.96□□□□□ -0.49
SCN1B-202ENST00000415950 MMP12P39900 470 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 CLDN6P56747 220 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 RAP2BP61225 183 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 GLO1Q04760 184 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 DCST2Q5T1A1 773 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 FAM71E1Q6IPT2 247 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 ZNF619Q8N2I2 560 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 GPR137CQ8N3F9 429 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 AVL9Q8NBF6 648 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 DNAAF1Q8NEP3 725 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 OR10K1Q8NGX5 313 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 ZFAND1Q8TCF1 268 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 LPAR4Q99677 370 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 NKX3-1Q99801 234 aaPredicted RBP11.96□□□□□ -0.49
SCN1B-202ENST00000415950 C1QTNF6Q9BXI9 259 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 DNTTIP1Q9H147 329 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 SEMA4GQ9NTN9 838 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 PLCXD1Q9NUJ7 323 aa11.96□□□□□ -0.49
SCN1B-202ENST00000415950 PUS1Q9Y606 427 aaKnown RBP eCLIP11.96□□□□□ -0.49
SCN1B-202ENST00000415950 A0A0A6YYJ9 748 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 A8MVJ9 347 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 TMPRSS11DO60235 418 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 RGS11O94810 467 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 CD22P20273 847 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 PXNP49023 591 aaPredicted RBP11.96□□□□□ -0.5
SCN1B-202ENST00000415950 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.5
SCN1B-202ENST00000415950 DLX2Q07687 328 aaPredicted RBP11.96□□□□□ -0.5
SCN1B-202ENST00000415950 ASAH1Q13510 395 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 HBMQ6B0K9 141 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 UNQ6126/PRO20091Q6UXV3 157 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 RELL2Q8NC24 303 aaPredicted RBP11.96□□□□□ -0.5
SCN1B-202ENST00000415950 IL1F10Q8WWZ1 152 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 NMNAT3Q96T66 252 aa11.96□□□□□ -0.5
SCN1B-202ENST00000415950 HCAR1Q9BXC0 346 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms