RNA–Protein interactions for RNA: ENST00000415164.5

UBXN4-202, Transcript of UBX domain protein 4, humanhuman

TSL 4

Gene UBXN4, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-202ENST00000415164 SOX7Q9BT81 388 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 C20orf27Q9GZN8 174 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 ADAM19Q9H013 955 aa16.8■□□□□ 0.28
UBXN4-202ENST00000415164 CACYBPQ9HB71 228 aaKnown RBP16.8■□□□□ 0.28
UBXN4-202ENST00000415164 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.8■□□□□ 0.28
UBXN4-202ENST00000415164 YLPM1P49750 1951 aaKnown RBP16.79■□□□□ 0.28
UBXN4-202ENST00000415164 A8MVM7 634 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 hCG_2039718K7EN88 272 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 FAAHO00519 579 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 FRS3O43559 492 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 DAOP14920 347 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 BGNP21810 368 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 RPS4Y1P22090 263 aaKnown RBP16.79■□□□□ 0.28
UBXN4-202ENST00000415164 CALCRP30988 508 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 CAPZA2P47755 286 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 IDH3GP51553 393 aaPredicted RBP16.79■□□□□ 0.28
UBXN4-202ENST00000415164 VSNL1P62760 191 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 IL1RL1Q01638 556 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 ROR2Q01974 943 aaKnown RBP16.79■□□□□ 0.28
UBXN4-202ENST00000415164 NPRL3Q12980 569 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 C1QTNF12Q5T7M4 302 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 C1orf140Q5VVS0 124 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 AP1ARQ63HQ0 302 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 WBP2NLQ6ICG8 309 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 LINGO2Q7L985 606 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 SPATA21Q7Z572 469 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 ZCCHC24Q8N2G6 241 aaKnown RBP16.79■□□□□ 0.28
UBXN4-202ENST00000415164 KDM8Q8N371 416 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 SVOPLQ8N434 492 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 BCL2L2Q92843 193 aaPredicted RBP16.79■□□□□ 0.28
UBXN4-202ENST00000415164 ZBTB9Q96C00 473 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 ZBTB18Q99592 522 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 DYNLRB1Q9NP97 96 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 PNPOQ9NVS9 261 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 P2RX2Q9UBL9 471 aa16.79■□□□□ 0.28
UBXN4-202ENST00000415164 MALRD1Q5VYJ5 2156 aa16.78■□□□□ 0.28
UBXN4-202ENST00000415164 VSTM5A8MXK1 200 aa16.78■□□□□ 0.28
UBXN4-202ENST00000415164 SNUPNO95149 360 aaKnown RBP16.78■□□□□ 0.28
UBXN4-202ENST00000415164 STAMBPO95630 424 aa16.78■□□□□ 0.28
UBXN4-202ENST00000415164 BCHEP06276 602 aa16.78■□□□□ 0.28
UBXN4-202ENST00000415164 CELA3BP08861 270 aa16.78■□□□□ 0.28
UBXN4-202ENST00000415164 APEX1P27695 318 aaKnown RBP16.78■□□□□ 0.28
UBXN4-202ENST00000415164 CRATP43155 626 aa16.78■□□□□ 0.28
UBXN4-202ENST00000415164 PPOXP50336 477 aa16.78■□□□□ 0.28
UBXN4-202ENST00000415164 CLDN17P56750 224 aa16.78■□□□□ 0.28
UBXN4-202ENST00000415164 KRT71Q3SY84 523 aa16.78■□□□□ 0.28
UBXN4-202ENST00000415164 RPS26P11Q5JNZ5 115 aaPredicted RBP16.78■□□□□ 0.28
UBXN4-202ENST00000415164 LRRC34Q8IZ02 419 aa16.78■□□□□ 0.28
UBXN4-202ENST00000415164 SNX18Q96RF0 628 aa16.78■□□□□ 0.28
UBXN4-202ENST00000415164 PAIP2Q9BPZ3 127 aaKnown RBP16.78■□□□□ 0.28
UBXN4-202ENST00000415164 PLK3Q9H4B4 646 aa16.78■□□□□ 0.28
UBXN4-202ENST00000415164 ZNF443Q9Y2A4 671 aaPredicted RBP16.78■□□□□ 0.28
UBXN4-202ENST00000415164 CDHR4A6H8M9 788 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 PDE5AO76074 875 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 VAMP5O95183 116 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 AHSA1O95433 338 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 ANP32DO95626 131 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 KRT75O95678 551 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 PGRP06401 933 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 ALDOCP09972 364 aaKnown RBP16.77■□□□□ 0.28
UBXN4-202ENST00000415164 PRG2P13727 222 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 IL12AP29459 219 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 IL2RGP31785 369 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 THBS4P35443 961 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 CHN2P52757 468 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 TXNL4AP83876 142 aaKnown RBP16.77■□□□□ 0.28
UBXN4-202ENST00000415164 EPHX4Q8IUS5 362 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 OR4F15Q8NGB8 312 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 C1orf159Q96HA4 380 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 SORT1Q99523 831 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 CENPHQ9H3R5 247 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 PIF1Q9H611 641 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 RASD1Q9Y272 281 aa16.77■□□□□ 0.28
UBXN4-202ENST00000415164 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.77■□□□□ 0.28
UBXN4-202ENST00000415164 ARPC4-TTLL3A0A0A6YYG9 625 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 OR6C65A6NJZ3 312 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 RFXANKO14593 260 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 BIRC5O15392 142 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 RGS16O15492 202 aaPredicted RBP16.76■□□□□ 0.27
UBXN4-202ENST00000415164 TCF21O43680 179 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 SEC14L2O76054 403 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 ETFAP13804 333 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 NPR2P20594 1047 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 ACAA2P42765 397 aaKnown RBP16.76■□□□□ 0.27
UBXN4-202ENST00000415164 RPS5P46782 204 aaKnown RBP16.76■□□□□ 0.27
UBXN4-202ENST00000415164 P2RY4P51582 365 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 CRISP3P54108 245 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 ARF1P84077 181 aaKnown RBP16.76■□□□□ 0.27
UBXN4-202ENST00000415164 STX3Q13277 289 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 CCNIQ14094 377 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 LARS2Q15031 903 aaKnown RBP16.76■□□□□ 0.27
UBXN4-202ENST00000415164 EFNB3Q15768 340 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 ADRM1Q16186 407 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 RINLQ6ZS11 566 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 MYPOPQ86VE0 399 aaPredicted RBP16.76■□□□□ 0.27
UBXN4-202ENST00000415164 GPR137CQ8N3F9 429 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 TPK1Q9H3S4 243 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 MEAF6Q9HAF1 191 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 KCNK9Q9NPC2 374 aa16.76■□□□□ 0.27
UBXN4-202ENST00000415164 AIG1Q9NVV5 245 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms