RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 SIGLEC5O15389 551 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 APBB3O95704 486 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 IFNA16P05015 189 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 ALDOBP05062 364 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 RAB40ALP0C0E4 278 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 ACSM4P0C7M7 580 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 TBC1D3HP0C7X1 549 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 SLC35E2P0CK97 266 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 MNDAP41218 407 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 ADPRHP54922 357 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 SIGLEC14Q08ET2 396 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 ZNF141Q15928 474 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 TBC1D3CQ6IPX1 549 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 TMEM81Q6P7N7 255 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 FAM199XQ6PEV8 388 aaPredicted RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 KCTD20Q7Z5Y7 419 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 GPAT4Q86UL3 456 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 YAF2Q8IY57 180 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 TBC1D3Q8IZP1 549 aaPredicted RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 SPICQ8N5J4 248 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 LGALS14Q8TCE9 139 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 RAB40AQ8WXH6 277 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 ZMYND19Q96E35 227 aaPredicted RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 SGTBQ96EQ0 304 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 SPRTNQ9H040 489 aaPredicted RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 SFXN1Q9H9B4 322 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 FBRSQ9HAH7 460 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 C12orf10Q9HB07 376 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 HRASLSQ9HDD0 168 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 NPDC1Q9NQX5 325 aaPredicted RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 DNAJB12Q9NXW2 375 aaKnown RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 ACTR10Q9NZ32 417 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 PIPOXQ9P0Z9 390 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 KLHL9Q9P2J3 617 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 NCDNQ9UBB6 729 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 RPS6KB2Q9UBS0 482 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 RCE1Q9Y256 329 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 FKBP7Q9Y680 259 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 MYO15AQ9UKN7 3530 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 IFITM5A6NNB3 132 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 IDSB3KWA1 339 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 H0YGG7 62 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 NUPL2O15504 423 aaKnown RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 GALR3O60755 368 aaPredicted RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 KRT33AO76009 404 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 NGFRP08138 427 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 CALCBP10092 127 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 CPN1P15169 458 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 DPP4P27487 766 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 LCN1P31025 176 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 PSMD4P55036 377 aaKnown RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 CLDN12P56749 244 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 ARF3P61204 181 aaPredicted RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 TAGLNQ01995 201 aaKnown RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 ID2Q02363 134 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 NFATC4Q14934 902 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 EXOSC7Q15024 291 aaKnown RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 ZMYND11Q15326 602 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 ZNHIT3Q15649 155 aaPredicted RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 PRRT3Q5FWE3 981 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 TMEM240Q5SV17 173 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 SLC6A19Q695T7 634 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 ENPP7Q6UWV6 458 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 NHLRC1Q6VVB1 395 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 PRSS42Q7Z5A4 293 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 SLC35F3Q8IY50 421 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 CA13Q8N1Q1 262 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 SDR9C7Q8NEX9 313 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 OR4K13Q8NH42 304 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 FCAMRQ8WWV6 532 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 RBPMSQ93062 196 aaKnown RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 ANKRD9Q96BM1 317 aaPredicted RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 S100A16Q96FQ6 103 aaKnown RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 TOE1Q96GM8 510 aaKnown RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 OR14A2Q96R54 314 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 UTP23Q9BRU9 249 aaKnown RBP8.98□□□□□ -0.97
CD44-206ENST00000415148 NMNAT2Q9BZQ4 307 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 KLK11Q9UBX7 282 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 GNG8Q9UK08 70 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 ZNF281Q9Y2X9 895 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 IER3IP1Q9Y5U9 82 aa8.98□□□□□ -0.97
CD44-206ENST00000415148 SPEGQ15772 3267 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 A6NCN8 305 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 TNFRSF10CO14798 259 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 LDOC1O95751 146 aaPredicted RBP8.97□□□□□ -0.97
CD44-206ENST00000415148 CT62P0C5K7 136 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 ICAM2P13598 275 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 AK4P27144 223 aaPredicted RBP8.97□□□□□ -0.97
CD44-206ENST00000415148 PSMB10P40306 273 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 MECP2P51608 486 aaKnown RBP8.97□□□□□ -0.97
CD44-206ENST00000415148 RAB14P61106 215 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 TSPAN5P62079 268 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 DHODHQ02127 395 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 BTN1A1Q13410 526 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 MELKQ14680 651 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 TUSC1Q2TAM9 212 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 TCTE1Q5JU00 501 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 HES5Q5TA89 166 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 OLFML2AQ68BL7 652 aa8.97□□□□□ -0.97
CD44-206ENST00000415148 RNF44Q7L0R7 432 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms