RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 PRKCDQ05655 676 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 CACNG1Q06432 222 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 CDH17Q12864 832 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 PLA2G7Q13093 441 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SELENBP1Q13228 472 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 PRPSAP1Q14558 356 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 EMC2Q15006 297 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 UGCGQ16739 394 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 C2CD6Q53TS8 623 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SPANXN2Q5MJ10 180 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 PPM1LQ5SGD2 360 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SYT6Q5T7P8 510 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 PRAMEF7Q5VXH5 474 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 XAF1Q6GPH4 301 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 TMEM211Q6ICI0 200 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SLC25A25Q6KCM7 469 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 TEX38Q6PEX7 206 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 DLEU7Q6UYE1 221 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 RNF165Q6ZSG1 346 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 TMEM26Q6ZUK4 368 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 BHLHA15Q7RTS1 189 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 ERASQ7Z444 233 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 ADGRD2Q7Z7M1 963 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 AKAP14Q86UN6 197 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 KCNMB4Q86W47 210 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 MISPQ8IVT2 679 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZBTB8OSQ8IWT0 167 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SELENOHQ8IZQ5 122 aaKnown RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 ELMOD1Q8N336 334 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 AMER3Q8N944 861 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF555Q8NEP9 628 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 TTLQ8NG68 377 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR7A2PQ8NGA2 310 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR4K14Q8NGD5 310 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR9K2Q8NGE7 335 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR5B17Q8NGF7 314 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR8J2Q8NGG1 315 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 OR6Q1Q8NGQ2 317 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 C9orf43Q8TAL5 461 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SLC2A14Q8TDB8 520 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 BLOC1S5Q8TDH9 187 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 CACNG8Q8WXS5 425 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 OSTF1Q92882 214 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 FAM46BQ96A09 425 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 NTAN1Q96AB6 310 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 HAVCR1Q96D42 359 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF486Q96H40 463 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 HSFY1Q96LI6 401 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SGK494Q96LW2 274 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 CCDC115Q96NT0 180 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 LRRC3BQ96PB8 259 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 CSPG4P5Q96PW8 444 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 PEBP4Q96S96 227 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 GPA33Q99795 319 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 RHNO1Q9BSD3 238 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 DCUN1D5Q9BTE7 237 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SNRNP25Q9BV90 132 aaKnown RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 UGT2B28Q9BY64 529 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 MFFQ9GZY8 342 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 HOXD1Q9GZZ0 328 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SIRPDQ9H106 197 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 DNTTIP1Q9H147 329 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 RGCCQ9H4X1 137 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SLA2Q9H6Q3 261 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 WDR55Q9H6Y2 383 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 CALHM2Q9HA72 323 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 POPDC3Q9HBV1 291 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 NEK6Q9HC98 313 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 SDR39U1Q9NRG7 319 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 MIOSQ9NXC5 875 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZDHHC2Q9UIJ5 367 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 C3orf18Q9UK00 162 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 VANGL2Q9ULK5 521 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 PDE10AQ9Y233 779 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 EIF3LQ9Y262 564 aaKnown RBP3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 TPRKBQ9Y3C4 175 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 HEY1Q9Y5J3 304 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 MMP24Q9Y5R2 645 aa3.24□□□□□ -1.89
HMGB3P23-201ENST00000414981 TRAV25A0A0B4J276 109 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 IGKV6-21A0A0C4DH24 114 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 C13orf42A0A1B0GVH6 325 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 A0A1W2PP18 115 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 MED19A0JLT2 244 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ANTXRLA6NF34 631 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 TMEM210A6NLX4 147 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF99A8MXY4 864 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 LOC110117498-PIK3R3F6TDL0 507 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 TRIM77I1YAP6 450 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 M0QYV0 167 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 M0R3G1 203 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF208O43345 1280 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 DPM1O60762 260 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 BCAS1O75363 584 aaPredicted RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 CSO75390 466 aaKnown RBP3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 UPK1BO75841 260 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZMPSTE24O75844 475 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 PIAS1O75925 651 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 SNAPC5O75971 98 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 ANXA9O76027 345 aa3.23□□□□□ -1.89
HMGB3P23-201ENST00000414981 GLCEO94923 617 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms