RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 SERPINB5P36952 375 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 KRT6CP48668 564 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 EVX1P49640 407 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 SESN3P58005 492 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 POU6F2P78424 691 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-208ENST00000414711 MSMPQ1L6U9 139 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 FAM71E1Q6IPT2 247 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 KRT80Q6KB66 452 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 FAM110DQ8TAY7 271 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-208ENST00000414711 ZNF317Q96PQ6 595 aaPredicted RBP13.47□□□□□ -0.25
CPNE1-208ENST00000414711 TMEM237Q96Q45 408 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 HOXD1Q9GZZ0 328 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 NOX3Q9HBY0 568 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 FAM53CQ9NYF3 392 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 KLHL21Q9UJP4 597 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 STK38LQ9Y2H1 464 aa13.47□□□□□ -0.25
CPNE1-208ENST00000414711 LOC100653049A0A140TA62 436 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 ZNF264O43296 627 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 NPHS1O60500 1241 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 KRT34O76011 436 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 OR4F21O95013 312 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 SERPINE1P05121 402 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 UBL4AP11441 157 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 ATP4BP51164 291 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 SEC24CP53992 1094 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 KRTAP10-3P60369 221 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 CHI3L2Q15782 390 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 FAM189A2Q15884 450 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 TAF9Q16594 264 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 UNC50Q53HI1 259 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 KLF17Q5JT82 389 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-208ENST00000414711 ATG16L1Q676U5 607 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 CDC73Q6P1J9 531 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 WDFY1Q8IWB7 410 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 ZNF483Q8TF39 744 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-208ENST00000414711 BCL2L2Q92843 193 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-208ENST00000414711 TMEM45BQ96B21 275 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 SYT3Q9BQG1 590 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 GATA5Q9BWX5 397 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-208ENST00000414711 ZNF225Q9UK10 706 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 HDGFL3Q9Y3E1 203 aa13.46□□□□□ -0.25
CPNE1-208ENST00000414711 SPIN1Q9Y657 262 aaPredicted RBP13.46□□□□□ -0.25
CPNE1-208ENST00000414711 BIRC6Q9NR09 4857 aa13.46□□□□□ -0.26
CPNE1-208ENST00000414711 A0A096LPE4 126 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 A0A1W2PPZ6 126 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 TMEM114B3SHH9 223 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 ZNF587BE7ETH6 402 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 EIF4E2O60573 245 aaKnown RBP13.45□□□□□ -0.26
CPNE1-208ENST00000414711 KRT33AO76009 404 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 BGNP21810 368 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 CDH13P55290 713 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 OR2B6P58173 313 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 LCN2P80188 198 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 H3F3AP84243 136 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 CLCQ05315 142 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 STX3Q13277 289 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 SLC17A1Q14916 467 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 MAD2L1BPQ15013 274 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-208ENST00000414711 FRMD7Q6ZUT3 714 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 RETREG3Q86VR2 466 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 DEFB108BQ8NET1 73 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 TMEM234Q8WY98 164 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 CDS1Q92903 461 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 RAB8BQ92930 207 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 CHMP6Q96FZ7 201 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 AURKBQ96GD4 344 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-208ENST00000414711 C16orf58Q96GQ5 468 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 ALKBH3Q96Q83 286 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-208ENST00000414711 THUMPD3Q9BV44 507 aaKnown RBP13.45□□□□□ -0.26
CPNE1-208ENST00000414711 GSTO2Q9H4Y5 243 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 CHRNA9Q9UGM1 479 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 DTNAQ9Y4J8 743 aa13.45□□□□□ -0.26
CPNE1-208ENST00000414711 CLPSL1A2RUU4 121 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 PDPK1O15530 556 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 CDC14BO60729 498 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 NGFP01138 241 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 SELEP16581 610 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 LOXL3P58215 753 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 BTKQ06187 659 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 NPRL3Q12980 569 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 LCP2Q13094 533 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 EXOSC6Q5RKV6 272 aaKnown RBP13.44□□□□□ -0.26
CPNE1-208ENST00000414711 ZCCHC12Q6PEW1 402 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 ZCCHC23Q6ZST2 131 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 AAED1Q7RTV5 226 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 MAGEE2Q8TD90 523 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-208ENST00000414711 LRRC8CQ8TDW0 803 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 MAGEB18Q96M61 343 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 OR11A1Q9GZK7 315 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 RASSF4Q9H2L5 321 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 NELFAQ9H3P2 528 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 ZNF385DQ9H6B1 395 aa13.44□□□□□ -0.26
CPNE1-208ENST00000414711 ARHGAP32A7KAX9 2087 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 FAM181BA6NEQ2 426 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 DNAJA2O60884 412 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 ULK1O75385 1050 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 CYP7B1O75881 506 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 SEC14L2O76054 403 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 NAT2P11245 290 aa13.43□□□□□ -0.26
CPNE1-208ENST00000414711 CBR1P16152 277 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms