RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 NPTX1Q15818 432 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 ACKR1Q16570 336 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 TSPO2Q5TGU0 170 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 SEZ6L2Q6UXD5 910 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 CCDC80Q76M96 950 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 AAED1Q7RTV5 226 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 SPATA21Q7Z572 469 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 RBM45Q8IUH3 476 aaKnown RBP13.06□□□□□ -0.32
LIMS4-201ENST00000413601 KDM8Q8N371 416 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 OR4D11Q8NGI4 311 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 RP9Q8TA86 221 aaKnown RBP13.06□□□□□ -0.32
LIMS4-201ENST00000413601 TMEM45BQ96B21 275 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 FAM107BQ9H098 131 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 CXXC4Q9H2H0 198 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 SLC7A10Q9NS82 523 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 UPB1Q9UBR1 384 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 RASD1Q9Y272 281 aa13.06□□□□□ -0.32
LIMS4-201ENST00000413601 HEATR1Q9H583 2144 aaKnown RBP13.06□□□□□ -0.32
LIMS4-201ENST00000413601 TRAV36DV7A0A075B6V5 113 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 CIB4A0PJX0 185 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 CPSF4LA6NMK7 179 aaKnown RBP13.05□□□□□ -0.32
LIMS4-201ENST00000413601 AIM2O14862 343 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 OR2T1O43869 369 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 VAMP5O95183 116 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 ITGA5P08648 1049 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 CBLP22681 906 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 GYS2P54840 703 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 PPA1Q15181 289 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 DEFB113Q30KQ7 82 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 ENTPD8Q5MY95 495 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 TIMM23BQ5SRD1 257 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 FAM69AQ5T7M9 428 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 C9orf135Q5VTT2 229 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 C5orf46Q6UWT4 87 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 ZNF704Q6ZNC4 412 aaPredicted RBP13.05□□□□□ -0.32
LIMS4-201ENST00000413601 CREB3L2Q70SY1 520 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 TREML1Q86YW5 311 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 MUCL1Q96DR8 90 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 ALPK1Q96QP1 1244 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 NGBQ9NPG2 151 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 TAS2R16Q9NYV7 291 aa13.05□□□□□ -0.32
LIMS4-201ENST00000413601 AKAP9Q99996 3911 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 A0A1W2PR80 420 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 OR5H1A6NKK0 313 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 M0R082 166 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 PDLIM1O00151 329 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 FMO6PO60774 539 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 GRPRP30550 384 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 LGALS3BPQ08380 585 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 VEZF1Q14119 521 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 GABRA6Q16445 453 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 NCMAPQ5T1S8 102 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 ERICH5Q6P6B1 374 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 ZNF613Q6PF04 617 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 TSPYL5Q86VY4 417 aaPredicted RBP13.04□□□□□ -0.32
LIMS4-201ENST00000413601 P2RY8Q86VZ1 359 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 EPHX4Q8IUS5 362 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 OR52N5Q8NH56 324 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 ZNF417Q8TAU3 575 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 ADAMTS16Q8TE57 1224 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 RASSF5Q8WWW0 418 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 ZNF587Q96SQ5 575 aaPredicted RBP13.04□□□□□ -0.32
LIMS4-201ENST00000413601 TMEM204Q9BSN7 226 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 SLCO5A1Q9H2Y9 848 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 ESRP2Q9H6T0 727 aaKnown RBP13.04□□□□□ -0.32
LIMS4-201ENST00000413601 CMTM6Q9NX76 183 aa13.04□□□□□ -0.32
LIMS4-201ENST00000413601 DPRXA6NFQ7 191 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 FAM220BPB1ANY3 271 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 CHP2O43745 196 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 FZD7O75084 574 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 BGLAPP02818 100 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 THY1P04216 161 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 ZNF43P17038 809 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 TNFRSF1BP20333 461 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 DRD4P21917 467 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 LSP1P33241 339 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 SELENOPP49908 381 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 CLDN17P56750 224 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 LTBQ06643 244 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 BSPH1Q075Z2 132 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 SWT1Q5T5J6 900 aaKnown RBP13.03□□□□□ -0.32
LIMS4-201ENST00000413601 NIPAL3Q6P499 406 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 LINC00114Q6XXX2 140 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 WDR88Q6ZMY6 472 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 H1FNTQ75WM6 255 aaPredicted RBP13.03□□□□□ -0.32
LIMS4-201ENST00000413601 POMGNT2Q8NAT1 580 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 OR2T12Q8NG77 320 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 PROX1Q92786 737 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 MUS81Q96NY9 551 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 OXGR1Q96P68 337 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 MOGAT1Q96PD6 335 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 EPYCQ99645 322 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 TMEM43Q9BTV4 400 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 NPAP1Q9NZP6 1156 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 GMPR2Q9P2T1 348 aaKnown RBP13.03□□□□□ -0.32
LIMS4-201ENST00000413601 B3GAT1Q9P2W7 334 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 B3GALT5Q9Y2C3 310 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 SH3GLB1Q9Y371 365 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 RNF115Q9Y4L5 304 aa13.03□□□□□ -0.32
LIMS4-201ENST00000413601 ROS1P08922 2347 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms