RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 OR10W1Q8NGF6 305 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 CTHRC1Q96CG8 243 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 WDR92Q96MX6 357 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 YPEL4Q96NS1 127 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 FAM110AQ9BQ89 295 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 SELENOIQ9C0D9 397 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 OR2AG1Q9H205 316 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 SLC25A19Q9HC21 320 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 HEBP1Q9NRV9 189 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 MSRAQ9UJ68 235 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 NOD1Q9Y239 953 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 PCDHB1Q9Y5F3 818 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 OR51B4Q9Y5P0 310 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 OR2M5A3KFT3 312 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 C2CD4BA6NLJ0 364 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 SUPT3HB4E1H0 165 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 C1QTNF3-AMACRE9PGA6 284 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 DVL1O14640 695 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 RAMP3O60896 148 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 NDUFB8O95169 186 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 PTHP01270 115 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 CD5P06127 495 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 HOXC6P09630 235 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 HNRNPA1P09651 372 aaKnown RBP eCLIP4.82□□□□□ -1.64
HERC4-205ENST00000412272 ITPKBP27987 946 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 GABRR2P28476 465 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 RBM34P42696 430 aaKnown RBP4.82□□□□□ -1.64
HERC4-205ENST00000412272 ZNF140P52738 457 aaPredicted RBP4.82□□□□□ -1.64
HERC4-205ENST00000412272 TAS2R38P59533 333 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 HERV-K104P63124 156 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 CRMP1Q14194 572 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 PSG3Q16557 428 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 BSXQ3C1V8 233 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 SEZ6Q53EL9 994 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 TMEM71Q6P5X7 295 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 TMEM270Q6UE05 265 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 ENPP6Q6UWR7 440 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 PLPPR4Q7Z2D5 763 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 WFDC8Q8IUA0 241 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 SPICQ8N5J4 248 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 ACBD7Q8N6N7 88 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 OR56A4Q8NGH8 313 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 RNASEH2CQ8TDP1 164 aaKnown RBP4.82□□□□□ -1.64
HERC4-205ENST00000412272 DPF1Q92782 380 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 OR2M4Q96R27 311 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 PANX1Q96RD7 426 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 DHX35Q9H5Z1 703 aaKnown RBP4.82□□□□□ -1.64
HERC4-205ENST00000412272 CXorf36Q9H7Y0 433 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 TPT1P8Q9HAU6 139 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 HHATLQ9HCP6 504 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 MMP25Q9NPA2 562 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 TRMT112Q9UI30 125 aaKnown RBP4.82□□□□□ -1.64
HERC4-205ENST00000412272 ANK1P16157 1881 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 GBF1Q92538 1859 aa4.82□□□□□ -1.64
HERC4-205ENST00000412272 PPIAL4EA0A075B759 164 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 PPIAL4CA0A0B4J2A2 164 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 A0A1B0GV72 72 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 PPIAL4DF5H284 164 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 SAP30O75446 220 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ZNF432O94892 652 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 TBC1D3HP0C7X1 549 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 PPIAL4FP0DN26 164 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 CTSAP10619 480 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 HOXB9P17482 250 aaPredicted RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 DRD1P21728 446 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 CCNOP22674 350 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 PSMB5P28074 263 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 GKP32189 559 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 SDC2P34741 201 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 RAB7AP51149 207 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 SCAND1P57086 179 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 RGS8P57771 180 aaPredicted RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 TAS2R39P59534 338 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 PPIAP62937 165 aaKnown RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 KIAA0040Q15053 153 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 MORN1Q5T089 497 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 HIST2H3PS2Q5TEC6 136 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 NAPEPLDQ6IQ20 393 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ADAM5Q6NVV9 412 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 FAAP20Q6NZ36 180 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 TRMT1LQ7Z2T5 733 aaKnown RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 C6orf120Q7Z4R8 191 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 TUSC5Q8IXB3 177 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ST6GALNAC3Q8NDV1 305 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ARRDC2Q8TBH0 407 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 DVL3Q92997 716 aaPredicted RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 TMEM19Q96HH6 336 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 CMKLR1Q99788 373 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 SEMA3CQ99985 751 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 MRPL45Q9BRJ2 306 aaKnown RBP4.81□□□□□ -1.64
HERC4-205ENST00000412272 WDR18Q9BV38 432 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 FBRSQ9HAH7 460 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 NMRK2Q9NPI5 230 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 CENPMQ9NSP4 180 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 SLC25A13Q9UJS0 675 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 RHBDD3Q9Y3P4 386 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 DNAJC15Q9Y5T4 150 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 ZNF236Q9UL36 1845 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 RLFQ13129 1914 aa4.81□□□□□ -1.64
HERC4-205ENST00000412272 TRBV5-3A0A0A0MS03 114 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms