RNA–Protein interactions for RNA: ENST00000412227.6

CROT-202, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 1 (best) BASIC

Gene CROT, Length 1,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-202ENST00000412227 WDR4P57081 412 aaKnown RBP19.17■□□□□ 0.66
CROT-202ENST00000412227 ZSWIM7Q19AV6 140 aa19.17■□□□□ 0.66
CROT-202ENST00000412227 TBRG1Q3YBR2 411 aa19.17■□□□□ 0.66
CROT-202ENST00000412227 RPS26P11Q5JNZ5 115 aaPredicted RBP19.17■□□□□ 0.66
CROT-202ENST00000412227 CYB5R2Q6BCY4 276 aa19.17■□□□□ 0.66
CROT-202ENST00000412227 CREB3L2Q70SY1 520 aa19.17■□□□□ 0.66
CROT-202ENST00000412227 OR1K1Q8NGR3 316 aa19.17■□□□□ 0.66
CROT-202ENST00000412227 MGARPQ8TDB4 240 aa19.17■□□□□ 0.66
CROT-202ENST00000412227 RMND5AQ9H871 391 aa19.17■□□□□ 0.66
CROT-202ENST00000412227 CUBNO60494 3623 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.16■□□□□ 0.664e-13■■■■□ 26.6
CROT-202ENST00000412227 A0A096LPI6 279 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 IGHV1-18A0A0C4DH31 117 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 A0A0G2JPF8 293 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 HNRNPCL2B2RXH8 293 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 HNRNPCL3B7ZW38 293 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 HNRNPCL1O60812 293 aaKnown RBP19.16■□□□□ 0.66
CROT-202ENST00000412227 LGI1O95970 557 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 HNRNPCL4P0DMR1 293 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 SELENOPP49908 381 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 UBE2NP61088 152 aaKnown RBP19.16■□□□□ 0.66
CROT-202ENST00000412227 LGALS3BPQ08380 585 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 SWI5Q1ZZU3 235 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 MST1LQ2TV78 715 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 GTDC1Q4AE62 458 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 PRAMEF8Q5VWM4 474 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 PRAMEF7Q5VXH5 474 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 ATG16L1Q676U5 607 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 NIPAL3Q6P499 406 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 PHC2Q8IXK0 858 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 TMEM158Q8WZ71 300 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 C3orf49Q96BT1 292 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 TMEM19Q96HH6 336 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 ITCHQ96J02 903 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 ALKBH3Q96Q83 286 aaPredicted RBP19.16■□□□□ 0.66
CROT-202ENST00000412227 SLC38A2Q96QD8 506 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 SPATA9Q9BWV2 254 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 BEX2Q9BXY8 128 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 TMEM160Q9NX00 188 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 THUMPD1Q9NXG2 353 aaKnown RBP19.16■□□□□ 0.66
CROT-202ENST00000412227 RASD1Q9Y272 281 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 FKBP7Q9Y680 259 aa19.16■□□□□ 0.66
CROT-202ENST00000412227 TMEM120BA0PK00 339 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 OR6C65A6NJZ3 312 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 CRYAAP02489 173 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 IGHV4-31P0DP07 118 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 PAX7P23759 505 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 PDLIM4P50479 330 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 LSM11P83369 360 aaKnown RBP eCLIP19.15■□□□□ 0.66
CROT-202ENST00000412227 SLC9B1Q4ZJI4 515 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 C6orf10Q5SRN2 563 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 SERPINA11Q86U17 422 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 STK35Q8TDR2 534 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 SLC25A36Q96CQ1 311 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 MAELQ96JY0 434 aaKnown RBP19.15■□□□□ 0.66
CROT-202ENST00000412227 ZIM2Q9NZV7 527 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 IFT52Q9Y366 437 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 CHST2Q9Y4C5 530 aa19.15■□□□□ 0.66
CROT-202ENST00000412227 TMEM229AB2RXF0 380 aa19.14■□□□□ 0.65
CROT-202ENST00000412227 ZNF500O60304 480 aaPredicted RBP19.14■□□□□ 0.65
CROT-202ENST00000412227 NPIPB7O75200 414 aa19.14■□□□□ 0.65
CROT-202ENST00000412227 AHSA1O95433 338 aa19.14■□□□□ 0.65
CROT-202ENST00000412227 ZNF16P17020 682 aaPredicted RBP19.14■□□□□ 0.65
CROT-202ENST00000412227 SNRPD2P62316 118 aaKnown RBP19.14■□□□□ 0.65
CROT-202ENST00000412227 ZNF311Q5JNZ3 666 aa19.14■□□□□ 0.65
CROT-202ENST00000412227 MSANTD1Q6ZTZ1 278 aa19.14■□□□□ 0.65
CROT-202ENST00000412227 EPHX4Q8IUS5 362 aa19.14■□□□□ 0.65
CROT-202ENST00000412227 MFSD8Q8NHS3 518 aa19.14■□□□□ 0.65
CROT-202ENST00000412227 BCL2L2Q92843 193 aaPredicted RBP19.14■□□□□ 0.65
CROT-202ENST00000412227 SORCS2Q96PQ0 1159 aa19.14■□□□□ 0.65
CROT-202ENST00000412227 RAB21Q9UL25 225 aa19.14■□□□□ 0.65
CROT-202ENST00000412227 NR5A2O00482 541 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 UPK3AO75631 287 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 GTF2E2P29084 291 aaKnown RBP19.13■□□□□ 0.65
CROT-202ENST00000412227 SERPINF1P36955 418 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 POLR2JP52435 117 aaKnown RBP19.13■□□□□ 0.65
CROT-202ENST00000412227 GGTLC2Q14390 218 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 LINGO2Q7L985 606 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 SLC46A3Q7Z3Q1 461 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 KDM8Q8N371 416 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 VPS33AQ96AX1 596 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 VRK1Q99986 396 aaPredicted RBP19.13■□□□□ 0.65
CROT-202ENST00000412227 PIMREGQ9BSJ6 248 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 KATNB1Q9BVA0 655 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 LINC00470Q9BZP3 86 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 SHARPINQ9H0F6 387 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 SDR39U1Q9NRG7 319 aaPredicted RBP19.13■□□□□ 0.65
CROT-202ENST00000412227 CA10Q9NS85 328 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 LPAR3Q9UBY5 353 aa19.13■□□□□ 0.65
CROT-202ENST00000412227 A0A096LPE4 126 aa19.12■□□□□ 0.65
CROT-202ENST00000412227 ARPC4-TTLL3A0A0A6YYG9 625 aa19.12■□□□□ 0.65
CROT-202ENST00000412227 A0A1W2PPZ6 126 aa19.12■□□□□ 0.65
CROT-202ENST00000412227 UBDO15205 165 aa19.12■□□□□ 0.65
CROT-202ENST00000412227 PHF1O43189 567 aaPredicted RBP19.12■□□□□ 0.65
CROT-202ENST00000412227 LMX1BO60663 402 aa19.12■□□□□ 0.65
CROT-202ENST00000412227 PNMTP11086 282 aa19.12■□□□□ 0.65
CROT-202ENST00000412227 RPS5P46782 204 aaKnown RBP19.12■□□□□ 0.65
CROT-202ENST00000412227 GZMKP49863 264 aa19.12■□□□□ 0.65
CROT-202ENST00000412227 TUBA1BP68363 451 aa19.12■□□□□ 0.65
CROT-202ENST00000412227 TUBA4AP68366 448 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms