RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 RLIMQ9NVW2 624 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 LGALS13Q9UHV8 139 aa12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 FBXO9Q9UK97 447 aaPredicted RBP12.36□□□□□ -0.43
HLA-DQB2-229ENST00000411527 SH3PXD2BA1X283 911 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 WDR91A4D1P6 747 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 OR6C65A6NJZ3 312 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 A8MVM7 634 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 hCG_2039718K7EN88 272 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 IGLV1-44P01699 117 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TACSTD2P09758 323 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 MYZAPP0CAP1 466 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 NPR2P20594 1047 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 RPS4Y1P22090 263 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 THBS4P35443 961 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ANXA11P50995 505 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 P2RY4P51582 365 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CLNS1AP54105 237 aaKnown RBP12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 RUNX1T1Q06455 604 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 IFFO1Q0D2I5 559 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PRAMEF8Q5VWM4 474 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PRAMEF7Q5VXH5 474 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ZNF621Q6ZSS3 439 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 SPATA21Q7Z572 469 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 EPHX4Q8IUS5 362 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PEX5LQ8IYB4 626 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 SVOPLQ8N434 492 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TRIML2Q8N7C3 387 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 NUP37Q8NFH4 326 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PKNOX2Q96KN3 472 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ZNF317Q96PQ6 595 aaPredicted RBP12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PANX1Q96RD7 426 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 DOK1Q99704 481 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 BTNL2Q9UIR0 455 aa12.35□□□□□ -0.43
HLA-DQB2-229ENST00000411527 E9PBE3 544 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 FRS3O43559 492 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 GSNP06396 782 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 CELA3BP08861 270 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 HOXB1P14653 301 aaPredicted RBP12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 LBPP18428 481 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ACAA2P42765 397 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ETV4P43268 484 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 NME5P56597 212 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 COPZ1P61923 177 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TXNL4AP83876 142 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ARF1P84077 181 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ROR2Q01974 943 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ADRM1Q16186 407 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 COX20Q5RI15 118 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 C1orf140Q5VVS0 124 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 WBP2NLQ6ICG8 309 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 C12orf54Q6X4T0 127 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 VRK2Q86Y07 508 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ZNF786Q8N393 782 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 FAM169BQ8N8A8 192 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 OR52P1PQ8NH57 321 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PNPT1Q8TCS8 783 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 UBASH3BQ8TF42 649 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ANKRD27Q96NW4 1050 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 LINC00470Q9BZP3 86 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 NELFAQ9H3P2 528 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 ZNF442Q9H7R0 627 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 MOV10Q9HCE1 1003 aaKnown RBP12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 DYNLRB1Q9NP97 96 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 RASD1Q9Y272 281 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 RAP2CQ9Y3L5 183 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 PCDHB14Q9Y5E9 798 aa12.34□□□□□ -0.43
HLA-DQB2-229ENST00000411527 TMEM129A0AVI4 362 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CDHR4A6H8M9 788 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 LYNX1G3V0Z9 82 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 TYROBPO43914 113 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 IGKV3-15P01624 115 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SERPINE1P05121 402 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 TFPTP0C1Z6 253 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 LYNX1P0DP58 116 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 IFNGR1P15260 489 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CBR1P16152 277 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 NCF2P19878 526 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CDKN2CP42773 168 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 RPL14P50914 215 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CDH15P55291 814 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SH3BGRP55822 239 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CLDN17P56750 224 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ABCE1P61221 599 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 UFM1P61960 85 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 TRIP10Q15642 601 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 CHI3L2Q15782 390 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ZNF836Q6ZNA1 936 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 MYPOPQ86VE0 399 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 MEX3DQ86XN8 651 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 KDM8Q8N371 416 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 SLC25A36Q96CQ1 311 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 TEX37Q96LM6 180 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 NUF2Q9BZD4 464 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ROPN1BQ9BZX4 212 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 C20orf27Q9GZN8 174 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 OCEL1Q9H607 264 aa12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 ROPN1Q9HAT0 212 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB2-229ENST00000411527 METRNQ9UJH8 293 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms