RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 TEX35Q5T0J7 233 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 PDZK1Q5T2W1 519 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 AVPI1Q5T686 147 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 FAM219BQ5XKK7 198 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 FAM205BPQ63HN1 556 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ASPHD2Q6ICH7 369 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 KRT80Q6KB66 452 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ANKRD26P1Q6NSI1 321 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 NOXRED1Q6NXP6 359 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMEM154Q6P9G4 183 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 Q6ZPA2 131 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TUBA1AQ71U36 451 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 RHOUQ7L0Q8 258 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 EIF3MQ7L2H7 374 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TRIM46Q7Z4K8 759 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 R3HCC1LQ7Z5L2 792 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 GPAT4Q86UL3 456 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MDP1Q86V88 176 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MYPOPQ86VE0 399 aaPredicted RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 WDFY1Q8IWB7 410 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CMIPQ8IY22 773 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 BCL6BQ8N143 479 aaPredicted RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMEM99Q8N816 258 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZIC4Q8N9L1 334 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 GLB1L3Q8NCI6 653 aaPredicted RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 DEFB108BQ8NET1 73 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR9K2Q8NGE7 335 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR56A1Q8NGH5 318 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MGARPQ8TDB4 240 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ST7LQ8TDW4 575 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SNX33Q8WV41 574 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 OIT3Q8WWZ8 545 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 GTF3AQ92664 365 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TAF15Q92804 592 aaKnown RBP eCLIP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZDHHC16Q969W1 377 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MOAP1Q96BY2 351 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MTERF3Q96E29 417 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 FAM120BQ96EK7 910 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 DNAJA3Q96EY1 480 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 METTL2AQ96IZ6 378 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 EGLN2Q96KS0 407 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF48Q96MX3 618 aaPredicted RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF385AQ96PM9 386 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SDF2Q99470 211 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCT7Q99832 543 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SYT3Q9BQG1 590 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ERP44Q9BS26 406 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MRI1Q9BV20 369 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CCDC106Q9BWC9 280 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TAPBPLQ9BX59 468 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 LINC00470Q9BZP3 86 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 OR11A1Q9GZK7 315 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 NMUR2Q9GZQ4 415 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 DPH5Q9H2P9 285 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 KCNF1Q9H3M0 494 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SERHL2Q9H4I8 314 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 REEP4Q9H6H4 257 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SEC61A2Q9H9S3 476 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MID1IP1Q9NPA3 183 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 HINT3Q9NQE9 182 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 CTPS2Q9NRF8 586 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 DECR2Q9NUI1 292 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLCO1C1Q9NYB5 712 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 NKIRAS2Q9NYR9 191 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SEC14L4Q9UDX3 406 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 DUSP13Q9UII6 198 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 LEF1Q9UJU2 399 aaPredicted RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 PURGQ9UJV8 347 aaKnown RBP2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 MKLN1Q9UL63 735 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SNX12Q9UMY4 172 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 RCE1Q9Y256 329 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC35A3Q9Y2D2 325 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 PPP2R2CQ9Y2T4 447 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMED7Q9Y3B3 224 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 WIPI2Q9Y4P8 454 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 KCNE3Q9Y6H6 103 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 ARHGAP32A7KAX9 2087 aa2.02□□□□□ -2.09
RNU4-53P-201ENST00000410828 BIRC6Q9NR09 4857 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 DSPPQ9NZW4 1301 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 IGLV3-9A0A075B6K5 115 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 IGHV1-69-2A0A0G2JMI3 117 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 CENPVL1A0A0U1RR11 272 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 TMEM72A0PK05 275 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZC3H12DA2A288 527 aaKnown RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 ISPDA4D126 451 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 C5orf63A6NC05 138 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 ZNF503-AS2A6NEH8 195 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 FAM187AA6NFU0 413 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 LIPT2A6NK58 231 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 SRRM5B3KS81 715 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 TRIM49D1C9J1S8 452 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 NPIPB8E9PQR5 432 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 RPL36A-HNRNPH2H7BZ11 118 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC28A1O00337 649 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 HOXA3O43365 443 aaPredicted RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 TRAF3IP2O43734 574 aaPredicted RBP2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 FCMRO60667 390 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 SLC43A1O75387 559 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 UGT2B17O75795 530 aa2.01□□□□□ -2.09
RNU4-53P-201ENST00000410828 CLPXO76031 633 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms