RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 SLC6A5Q9Y345 797 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 PCDHGB7Q9Y5F8 929 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 FABP12A6NFH5 140 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 CDC40O60508 579 aaKnown RBP eCLIP18.3■□□□□ 0.52
USP39-204ENST00000409766 SC5DO75845 299 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 DLGAP3O95886 979 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 PGCP20142 388 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 EVI2BP34910 448 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 CTXN1P60606 82 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 ACTA2P62736 377 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 ACTG2P63267 376 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 SLC3A1Q07837 685 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 BAK1Q16611 211 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 LEG1Q6P5S2 330 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 FAM131AQ6UXB0 335 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 NFAM1Q8NET5 270 aaPredicted RBP18.3■□□□□ 0.52
USP39-204ENST00000409766 TP53INP1Q96A56 240 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 CCDC74BQ96LY2 380 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 COMMD3Q9UBI1 195 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 ST6GALNAC2Q9UJ37 374 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 RARRES3Q9UL19 164 aa18.3■□□□□ 0.52
USP39-204ENST00000409766 A0A0C4DFX4 3053 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 OR6C70A6NIJ9 312 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 C4orf47A7E2U8 309 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 KHNYNO15037 678 aaKnown RBP18.29■□□□□ 0.52
USP39-204ENST00000409766 TXNDC12O95881 172 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 HEXBP07686 556 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 CFL1P23528 166 aaKnown RBP18.29■□□□□ 0.52
USP39-204ENST00000409766 CXCR1P25024 350 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 SDHAP31040 664 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 RPS5P46782 204 aaKnown RBP18.29■□□□□ 0.52
USP39-204ENST00000409766 PPP3R1P63098 170 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 RPL18Q07020 188 aaKnown RBP18.29■□□□□ 0.52
USP39-204ENST00000409766 CDONQ4KMG0 1287 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 TP53I3Q53FA7 332 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 LINC01590Q5TEZ4 76 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 XKRXQ6PP77 449 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 NR2C2APQ86WQ0 139 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 EID2Q8N6I1 236 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 ABHD4Q8TB40 342 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 PELI1Q96FA3 418 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 TTTY10Q9BZA0 68 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 GAREM1Q9H706 876 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 FKRPQ9H9S5 495 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 GRIP1Q9Y3R0 1128 aa18.29■□□□□ 0.52
USP39-204ENST00000409766 FRYLO94915 3013 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 ADAM10O14672 748 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 MAGEB4O15481 346 aaPredicted RBP18.28■□□□□ 0.52
USP39-204ENST00000409766 SELENOFO60613 162 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 GLCEO94923 617 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 WISP1O95388 367 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 NUDT14O95848 222 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 F13BP05160 661 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 AZGP1P25311 298 aaKnown RBP18.28■□□□□ 0.52
USP39-204ENST00000409766 ACVR1BP36896 505 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 NRG3P56975 720 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 DCDP81605 110 aaKnown RBP18.28■□□□□ 0.52
USP39-204ENST00000409766 CBFBQ13951 182 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 ZNF385CQ66K41 422 aaPredicted RBP18.28■□□□□ 0.52
USP39-204ENST00000409766 OR6K6Q8NGW6 343 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 NAT6Q93015 286 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 TMCO6Q96DC7 493 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 TIGARQ9NQ88 270 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 EXPH5Q8NEV8 1989 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 OGG1O15527 345 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 SCO2O43819 266 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 SERPINI2O75830 405 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 IL7P13232 177 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 P2RX1P51575 399 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 SLC25A1P53007 311 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 NANOGNBQ7Z5D8 188 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 PXKQ7Z7A4 578 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 JAZF1Q86VZ6 243 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 EXD3Q8N9H8 876 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 LSM14AQ8ND56 463 aaKnown RBP18.28■□□□□ 0.52
USP39-204ENST00000409766 SETD6Q8TBK2 473 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 GHSRQ92847 366 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 SYNDIG1Q9H7V2 258 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 MARCH7Q9H992 704 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 RPRD1BQ9NQG5 326 aaKnown RBP18.28■□□□□ 0.52
USP39-204ENST00000409766 PPIEQ9UNP9 301 aaKnown RBP18.28■□□□□ 0.52
USP39-204ENST00000409766 COPS3Q9UNS2 423 aa18.28■□□□□ 0.52
USP39-204ENST00000409766 YKT6O15498 198 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 ALOX12BO75342 701 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 ONECUT2O95948 504 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 BGLAPP02818 100 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 CFIP05156 583 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 GP1BBP13224 206 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 SHC1P29353 583 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 CD97P48960 835 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 FAM27D1Q5T7N8 215 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 POMZP3Q6PJE2 187 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 LYPD4Q6UWN0 246 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 CCBE1Q6UXH8 406 aaPredicted RBP18.27■□□□□ 0.52
USP39-204ENST00000409766 C16orf47Q6ZP98 133 aaPredicted RBP18.27■□□□□ 0.52
USP39-204ENST00000409766 OVCH1Q7RTY7 1134 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 GDPD1Q8N9F7 314 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 KIAA1143Q96AT1 154 aaPredicted RBP18.27■□□□□ 0.52
USP39-204ENST00000409766 ALG12Q9BV10 488 aa18.27■□□□□ 0.52
USP39-204ENST00000409766 NPFFR2Q9Y5X5 522 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms