RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 IMPDH2P12268 514 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 GSTM3P21266 225 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 OMPP47874 163 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 SLC9A3P48764 834 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 CLDN15P56746 228 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 OR2B6P58173 313 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 SLC34A1Q06495 639 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 LAPTM4AQ15012 233 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 OR7A5Q15622 319 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 ZNF74Q16587 644 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 ANKDD1AQ495B1 522 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 GXYLT1Q4G148 440 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 ZNF770Q6IQ21 691 aaPredicted RBP14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 PGBD2Q6P3X8 592 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 HIST3H2AQ7L7L0 130 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 ZER1Q7Z7L7 766 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 STK32CQ86UX6 486 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 OR9Q2Q8NGE9 314 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 ZPLD1Q8TCW7 415 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 LIPHQ8WWY8 451 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 HIST1H2ACQ93077 130 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 EME1Q96AY2 570 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 SLC25A36Q96CQ1 311 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 CCDC120Q96HB5 630 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 FAM46AQ96IP4 442 aaKnown RBP14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 NAA11Q9BSU3 229 aaPredicted RBP14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 DGCR6LQ9BY27 220 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 TNFRSF10DQ9UBN6 386 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 MEMO1Q9Y316 297 aa14.8□□□□□ -0.04
TSPAN4-208ENST00000409531 SAC3D1A6NKF1 404 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 EFCAB9A8MZ26 197 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 AHRRA9YTQ3 701 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 FTCDNL1E5RQL4 147 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 E9PLN8 166 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 FZD7O75084 574 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 GABRA1P14867 456 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 FUT1P19526 365 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 FPR3P25089 353 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 PTGER4P35408 488 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 GPR4P46093 362 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 LSM11P83369 360 aaKnown RBP eCLIP14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 TSPAN31Q12999 210 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 TRIP10Q15642 601 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 OTUD3Q5T2D3 398 aaPredicted RBP14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 CD163Q86VB7 1156 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 SCAIQ8N9R8 606 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 ATG16L2Q8NAA4 619 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 AQP11Q8NBQ7 271 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 FEVQ99581 238 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 CIB1Q99828 191 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 VKORC1Q9BQB6 163 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 GABARAPL1Q9H0R8 117 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 C8orf4Q9NR00 106 aa14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 MCTS1Q9ULC4 181 aaKnown RBP14.79□□□□□ -0.04
TSPAN4-208ENST00000409531 ARHGAP21Q5T5U3 1957 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 PCNX1Q96RV3 2341 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 FIGNL2A6NMB9 653 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 H0YC42 278 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 CXCL13O43927 109 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 WDR1O75083 606 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 SYNGR4O95473 234 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 GASTP01350 101 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 HOXD4P09016 255 aaPredicted RBP14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 ASAH2BP0C7U1 165 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 MAKP20794 623 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 ENPP1P22413 925 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 PRKACGP22612 351 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 CBLP22681 906 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 GRPRP30550 384 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 TPD52P55327 224 aaPredicted RBP14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 COX10Q12887 443 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 EMC4Q5J8M3 183 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 PAQR6Q6TCH4 344 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 RPTNQ6XPR3 784 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 C3P1Q6ZMU1 363 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 SLC46A3Q7Z3Q1 461 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 OAFQ86UD1 273 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 HS3ST5Q8IZT8 346 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 OR5J2Q8NH18 312 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 DNAJA3Q96EY1 480 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 MOGAT1Q96PD6 335 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 RBM4BQ9BQ04 359 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 RBM4Q9BWF3 364 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 NDEL1Q9GZM8 345 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 TP63Q9H3D4 680 aaPredicted RBP14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 MRPL39Q9NYK5 338 aaKnown RBP14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 NKX1-2Q9UD57 310 aaPredicted RBP14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 PLEKHB1Q9UF11 243 aaPredicted RBP14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 B3GALT5Q9Y2C3 310 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 TEX15Q9BXT5 2789 aa14.78□□□□□ -0.04
TSPAN4-208ENST00000409531 CASQ2O14958 399 aaPredicted RBP14.77□□□□□ -0.04
TSPAN4-208ENST00000409531 KLF4O43474 513 aa14.77□□□□□ -0.04
TSPAN4-208ENST00000409531 FCGR2AP12318 317 aa14.77□□□□□ -0.04
TSPAN4-208ENST00000409531 GSSP48637 474 aa14.77□□□□□ -0.04
TSPAN4-208ENST00000409531 AGFG1P52594 562 aaKnown RBP14.77□□□□□ -0.04
TSPAN4-208ENST00000409531 SMSP52788 366 aa14.77□□□□□ -0.04
TSPAN4-208ENST00000409531 LTBQ06643 244 aa14.77□□□□□ -0.04
TSPAN4-208ENST00000409531 PMS2P3Q13401 168 aa14.77□□□□□ -0.04
TSPAN4-208ENST00000409531 ZNF239Q16600 458 aaKnown RBP14.77□□□□□ -0.04
TSPAN4-208ENST00000409531 FAHD1Q6P587 224 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms