RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 OR6S1Q8NH40 331 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 SLC22A8Q8TCC7 542 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 SPRYD4Q8WW59 207 aaPredicted RBP5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 ST8SIA1Q92185 356 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 SMPDL3BQ92485 455 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 HGDQ93099 445 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 KISS1RQ969F8 398 aaPredicted RBP5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 TAAR8Q969N4 342 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 KTI12Q96EK9 354 aaPredicted RBP5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 KCTD7Q96MP8 289 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 DDOQ99489 341 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 KATNB1Q9BVA0 655 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 HCAR1Q9BXC0 346 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 ULBP3Q9BZM4 244 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 STRADBQ9C0K7 418 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 NUAK2Q9H093 628 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 SMOC1Q9H4F8 434 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 AKIRIN1Q9H9L7 192 aaPredicted RBP5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 AKIP1Q9NQ31 210 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 TXNL4BQ9NX01 149 aaKnown RBP5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 TAS2R10Q9NYW0 307 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 MOKQ9UQ07 419 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 SF3B6Q9Y3B4 125 aaKnown RBP5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 NOX1Q9Y5S8 564 aa5.7□□□□□ -1.5
GTF3C3-202ENST00000409364 LAMA1P25391 3075 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 TMED7-TICAM2A0A0A6YYA0 188 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ANKUB1A6NFN9 424 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 TMEM200CA6NKL6 621 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 TP53I11O14683 189 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 NPIPB7O75200 414 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ZNF28P17035 718 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 CELP19835 753 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 CD40LGP29965 261 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 SDHAP31040 664 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 UQCRC1P31930 480 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 TGFBR1P36897 503 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 RPS19P39019 145 aaKnown RBP5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 RPS5P46782 204 aaKnown RBP5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 SLC25A1P53007 311 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 PPP5CP53041 499 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 DLX5P56178 289 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 FBXW4P57775 412 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 FOXL2P58012 376 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ERVK-25P63136 954 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 LTBQ06643 244 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 DOC2BQ14184 412 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 GGTLC2Q14390 218 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 MFSD13AQ14CX5 517 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 TRAM1Q15629 374 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.69□□□□□ -1.56e-8■■■■□ 20.6
GTF3C3-202ENST00000409364 COL28A1Q2UY09 1125 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 FAM69AQ5T7M9 428 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 FCRLBQ6BAA4 426 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 FAM199XQ6PEV8 388 aaPredicted RBP5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 B3GLCTQ6Y288 498 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 NANOGNBQ7Z5D8 188 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ZBTB46Q86UZ6 589 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 IGFN1Q86VF2 1251 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 JAZF1Q86VZ6 243 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 SIRT6Q8N6T7 355 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 LRRC75AQ8NAA5 344 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 SDR9C7Q8NEX9 313 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ATP6V1C2Q8NEY4 427 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 OR10H4Q8NGA5 316 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 OR2Y1Q8NGV0 311 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 MOSPD2Q8NHP6 518 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 M1APQ8TC57 530 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ELP5Q8TE02 316 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 THAP3Q8WTV1 239 aaPredicted RBP5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 RNF138Q8WVD3 245 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 TMEM203Q969S6 136 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ZNF524Q96C55 264 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 C8orf44Q96CB5 159 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 RNF31Q96EP0 1072 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 MOGAT1Q96PD6 335 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 NMNAT3Q96T66 252 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 MED18Q9BUE0 208 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ALG8Q9BVK2 526 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 NMNAT2Q9BZQ4 307 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 C6orf62Q9GZU0 229 aaPredicted RBP5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ZNF700Q9H0M5 742 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 RNF167Q9H6Y7 350 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ADGRL4Q9HBW9 690 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 TRIM36Q9NQ86 728 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 GRHPRQ9UBQ7 328 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 FBXO9Q9UK97 447 aaPredicted RBP5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 PADI1Q9ULC6 663 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 TMED7Q9Y3B3 224 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 PTRH2Q9Y3E5 179 aaKnown RBP5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ADAM18Q9Y3Q7 739 aa5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 ASCC3Q8N3C0 2202 aaKnown RBP5.69□□□□□ -1.5
GTF3C3-202ENST00000409364 IGLV3-32A0A0A0MS00 114 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 ZC3H12DA2A288 527 aaKnown RBP5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 OR6C68A6NDL8 312 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 J3QRK9 145 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 PLPP2O43688 288 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 SUSD5O60279 629 aa5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 TRIM3O75382 744 aaPredicted RBP5.68□□□□□ -1.5
GTF3C3-202ENST00000409364 KLF7O75840 302 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms