RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 PRRG4Q9BZD6 226 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 SLC19A3Q9BZV2 496 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 FAM215AQ9Y5M1 114 aa12.61□□□□□ -0.39
CHRNA1-204ENST00000409323 PRRG2O14669 202 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 MITFO75030 526 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 SOX14O95416 240 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 PLGP00747 810 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 AHCYP23526 432 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 PEX2P28328 305 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 MAP2K6P52564 334 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 CTBP2P56545 445 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 RAC3P60763 192 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 CSNK2A1P68400 391 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 SLC35A1P78382 337 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 RBPJQ06330 500 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 PMS2P3Q13401 168 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 ESPL1Q14674 2120 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 TRIP10Q15642 601 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 MYO7BQ6PIF6 2116 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 ZDHHC13Q8IUH4 622 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 CDK20Q8IZL9 346 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 RNF113BQ8IZP6 322 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 GCNT2Q8N0V5 402 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 ATG16L2Q8NAA4 619 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 MOSPD2Q8NHP6 518 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 DOCK7Q96N67 2140 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 TNFRSF13CQ96RJ3 184 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 KIF17Q9P2E2 1029 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 ZNF835Q9Y2P0 537 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 FAM208BQ5VWN6 2430 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 SLC22A20A6NK97 555 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 SOCS2O14508 198 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 OR2T1O43869 369 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 SYNGR4O95473 234 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 HPRP00739 348 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 F13BP05160 661 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 ASAH2BP0C7U1 165 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 ADORA3P0DMS8 318 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 HLA-DOBP13765 273 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 ZNF26P17031 533 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 ACVR2AP27037 513 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 AQP2P41181 271 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 CLK1P49759 484 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 DAPP51397 102 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 ARHGDIAP52565 204 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 C1orf94Q6P1W5 598 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 C5orf46Q6UWT4 87 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 SEM1Q6ZVN7 128 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 FCRLAQ7L513 359 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 MAMDC2Q7Z304 686 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 P4HA3Q7Z4N8 544 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 NANOGNBQ7Z5D8 188 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 OAFQ86UD1 273 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 CBR4Q8N4T8 237 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 C9orf106Q8NAJ2 232 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 PRR7Q8TB68 274 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 GNPDA2Q8TDQ7 276 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 CPNE4Q96A23 557 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 SLC29A1Q99808 456 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 ASPNQ9BXN1 380 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 ENKD1Q9H0I2 346 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 EGLN3Q9H6Z9 239 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 FKRPQ9H9S5 495 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 CHST11Q9NPF2 352 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 CLCF1Q9UBD9 225 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 TRAPPC4Q9Y296 219 aa12.6□□□□□ -0.39
CHRNA1-204ENST00000409323 ALPK2Q86TB3 2170 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 UNC119BA6NIH7 251 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 FIGNL2A6NMB9 653 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 EI24O14681 340 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 KLF4O43474 513 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 HIST1H2ABP04908 130 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 FKBP2P26885 142 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 P2RY4P51582 365 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 AGFG1P52594 562 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 RPL18Q07020 188 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 FHL1Q13642 323 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 C1orf185Q5T7R7 199 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 TMEM225Q6GV28 225 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 HIST3H2AQ7L7L0 130 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 KIF18BQ86Y91 864 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 HIPK1Q86Z02 1210 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 OR5J2Q8NH18 312 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 ZPLD1Q8TCW7 415 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 HIST1H2ACQ93077 130 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 EME1Q96AY2 570 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 MCCC2Q9HCC0 563 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 KRCC1Q9NPI7 259 aaPredicted RBP12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 TIGARQ9NQ88 270 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 MCTS1Q9ULC4 181 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 TMEM5Q9Y2B1 443 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 CFAP46Q8IYW2 2715 aa12.59□□□□□ -0.39
CHRNA1-204ENST00000409323 CHD6Q8TD26 2715 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 AHRRA9YTQ3 701 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 MS4A18H0YCH9 400 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 H0YJX3 145 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 PLPP3O14495 311 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 RNF13O43567 381 aa12.58□□□□□ -0.4
CHRNA1-204ENST00000409323 MT-ATP6P00846 226 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms