RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 PTAFRP25105 342 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 MPGP29372 298 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 AQP1P29972 269 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 SELENOPP49908 381 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 SCARB2Q14108 478 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 SLC22A25Q6T423 547 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 KLHL17Q6TDP4 642 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 CREB3L2Q70SY1 520 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 EPHX4Q8IUS5 362 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 C1orf162Q8NEQ5 155 aaPredicted RBP16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 MFSD8Q8NHS3 518 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 TRMT61AQ96FX7 289 aaKnown RBP16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 CPPED1Q9BRF8 314 aaPredicted RBP16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 VIPAS39Q9H9C1 493 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 SLC17A5Q9NRA2 495 aa16.91■□□□□ 0.3
SMARCB1-204ENST00000407422 ANK3Q12955 4377 aaKnown RBP16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 A0A1B0GWA3 101 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 ELOA3DA6NLF2 546 aaPredicted RBP16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 PNMTP11086 282 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 CLEC12BQ2HXU8 276 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 ELOA3BQ3SY89 546 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 DHRS4L2Q6PKH6 230 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 B3GLCTQ6Y288 498 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 DTX2Q86UW9 622 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 KRT73Q86Y46 540 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 POMGNT2Q8NAT1 580 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 ELOA3Q8NG57 546 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 RADILQ96JH8 1075 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 WFDC6Q9BQY6 131 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 ALG2Q9H553 416 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 PIF1Q9H611 641 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 ZNF385DQ9H6B1 395 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 TMEM38AQ9H6F2 299 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 RPS6KB2Q9UBS0 482 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 GDF2Q9UK05 429 aaPredicted RBP16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 CR1P17927 2039 aa16.9■□□□□ 0.3
SMARCB1-204ENST00000407422 SONP18583 2426 aaKnown RBP16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 EVPLLA8MZ36 301 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 VAMP5O95183 116 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 IGHV4-39P01824 125 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 SLC6A2P23975 617 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 TGFBR3Q03167 851 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 HIKESHIQ53FT3 197 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 C6orf89Q6UWU4 347 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 RETREG3Q86VR2 466 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 C17orf78Q8N4C9 275 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 LSMEM1Q8N8F7 131 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 TAAR8Q969N4 342 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 SPATA5L1Q9BVQ7 753 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 RABEP2Q9H5N1 569 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 NPHS2Q9NP85 383 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 POU2F3Q9UKI9 436 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 MGAT4BQ9UQ53 548 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 RASD1Q9Y272 281 aa16.89■□□□□ 0.29
SMARCB1-204ENST00000407422 IGKV1D-42A0A075B6H8 117 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 SASH3O75995 380 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 ACVR1BP36896 505 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 IRX1P78414 480 aaPredicted RBP16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 VEZF1Q14119 521 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 RUNDC3AQ59EK9 446 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 NIPAL3Q6P499 406 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 LINGO2Q7L985 606 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 MAPK1IP1LQ8NDC0 245 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 STON2Q8WXE9 905 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 ALKBH3Q96Q83 286 aaPredicted RBP16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 FAIMQ9NVQ4 179 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 CORO2BQ9UQ03 480 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 AMDHD2Q9Y303 409 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 ABCA1O95477 2261 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 TPST2O60704 377 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 EDF1O60869 148 aaKnown RBP16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 UPK3AO75631 287 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 KRT33AO76009 404 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 LGI1O95970 557 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 TTKP33981 857 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 DMTNQ08495 405 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 SELPLGQ14242 412 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 ALG10BQ5I7T1 473 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 DHDDSQ86SQ9 333 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 PTOV1Q86YD1 416 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 GRIP2Q9C0E4 1043 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 C12orf10Q9HB07 376 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 ARGLU1Q9NWB6 273 aaPredicted RBP16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 B3GAT1Q9P2W7 334 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 LEF1Q9UJU2 399 aaPredicted RBP16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 B3GALT5Q9Y2C3 310 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 NDUFAF1Q9Y375 327 aa16.88■□□□□ 0.29
SMARCB1-204ENST00000407422 RNF223E7ERA6 249 aa16.87■□□□□ 0.29
SMARCB1-204ENST00000407422 MTPNP58546 118 aa16.87■□□□□ 0.29
SMARCB1-204ENST00000407422 AGAP6Q5VW22 663 aa16.87■□□□□ 0.29
SMARCB1-204ENST00000407422 HIPK4Q8NE63 616 aa16.87■□□□□ 0.29
SMARCB1-204ENST00000407422 DNAJA4Q8WW22 397 aaPredicted RBP16.87■□□□□ 0.29
SMARCB1-204ENST00000407422 ZNF607Q96SK3 696 aa16.87■□□□□ 0.29
SMARCB1-204ENST00000407422 DHRS9Q9BPW9 319 aa16.87■□□□□ 0.29
SMARCB1-204ENST00000407422 A0A0G2JND7 137 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 ZNF587BE7ETH6 402 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 M0R082 166 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 MFN2O95140 757 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 CBLP22681 906 aa16.86■□□□□ 0.29
SMARCB1-204ENST00000407422 GTF2E2P29084 291 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms