RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 CLCA1A8K7I4 914 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 MS4A18H0YCH9 400 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 CDC42EP2O14613 210 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 AKR7A3O95154 331 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 VAMP5O95183 116 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 SAGP10523 405 aaPredicted RBP11.02□□□□□ -0.65
LINC00339-201ENST00000404210 GPR4P46093 362 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 PMS2P3Q13401 168 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 C3AR1Q16581 482 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 MS4A18Q3C1V0 323 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 OTUD3Q5T2D3 398 aaPredicted RBP11.02□□□□□ -0.65
LINC00339-201ENST00000404210 KDM4DQ6B0I6 523 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 GTF2IRD2BQ6EKJ0 949 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 PPP4R4Q6NUP7 873 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 ZNF585AQ6P3V2 769 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 ZBTB49Q6ZSB9 765 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 OAFQ86UD1 273 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 GTF2IRD2Q86UP8 949 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 EPHX4Q8IUS5 362 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 SLC43A2Q8N370 569 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 TMEM99Q8N816 258 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 ATG16L2Q8NAA4 619 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 OR5M9Q8NGP3 310 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 EME1Q96AY2 570 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 TNFRSF13CQ96RJ3 184 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 CIB1Q99828 191 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 NIPSNAP1Q9BPW8 284 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 RBM4BQ9BQ04 359 aaKnown RBP11.02□□□□□ -0.65
LINC00339-201ENST00000404210 RBM4Q9BWF3 364 aaKnown RBP11.02□□□□□ -0.65
LINC00339-201ENST00000404210 UCK2Q9BZX2 261 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 CHST11Q9NPF2 352 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 FANCFQ9NPI8 374 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 C8orf4Q9NR00 106 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 TAS2R5Q9NYW4 299 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 USE1Q9NZ43 259 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 SIGLEC7Q9Y286 467 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 HIF3AQ9Y2N7 669 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 KIAA1549Q9HCM3 1950 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 SVILO95425 2214 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 ATMQ13315 3056 aa11.02□□□□□ -0.65
LINC00339-201ENST00000404210 CD8B2A6NJW9 211 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 AQP7P3A6NL99 342 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 BLOC1S5-TXNDC5H3BN57 136 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 M0R082 166 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 PDLIM1O00151 329 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 PLPP3O14495 311 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 CYTIPO60759 359 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 SLC19A2O60779 497 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 RCBTB2O95199 551 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 OR6A2O95222 327 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 POU2F1P14859 743 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 P2RY4P51582 365 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 ALDH3A2P51648 485 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 PRPS1P60891 318 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 PPP2R2BQ00005 443 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 FHL1Q13642 323 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 DAG1Q14118 895 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 PDK3Q15120 406 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 PON3Q15166 354 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 TAF11Q15544 211 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 TRIP10Q15642 601 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 OGFRL1Q5TC84 451 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-201ENST00000404210 NSUN5P2Q63ZY6 315 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 TMEM225Q6GV28 225 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 RASSF6Q6ZTQ3 369 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 FCRLAQ7L513 359 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 CD163Q86VB7 1156 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 MEX3DQ86XN8 651 aaKnown RBP11.01□□□□□ -0.65
LINC00339-201ENST00000404210 DOLPP1Q86YN1 238 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 ZNF843Q8N446 348 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 OR51A7Q8NH64 312 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 ZNF417Q8TAU3 575 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 ROBO4Q8WZ75 1007 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 GTPBP3Q969Y2 492 aaKnown RBP11.01□□□□□ -0.65
LINC00339-201ENST00000404210 OXGR1Q96P68 337 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 ZNF587Q96SQ5 575 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-201ENST00000404210 SLC29A1Q99808 456 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 SF3B5Q9BWJ5 86 aaKnown RBP11.01□□□□□ -0.65
LINC00339-201ENST00000404210 PRRG4Q9BZD6 226 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 RASSF4Q9H2L5 321 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 TP63Q9H3D4 680 aaPredicted RBP11.01□□□□□ -0.65
LINC00339-201ENST00000404210 SMURF2Q9HAU4 748 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 IL20Q9NYY1 176 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 CLCF1Q9UBD9 225 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 RASD1Q9Y272 281 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 POFUT2Q9Y2G5 429 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 TLN1Q9Y490 2541 aaKnown RBP11.01□□□□□ -0.65
LINC00339-201ENST00000404210 COL6A6A6NMZ7 2263 aa11.01□□□□□ -0.65
LINC00339-201ENST00000404210 SLC22A20A6NK97 555 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 EIF4E1BA6NMX2 242 aaKnown RBP11□□□□□ -0.65
LINC00339-201ENST00000404210 SOCS2O14508 198 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 SMAD9O15198 467 aaKnown RBP11□□□□□ -0.65
LINC00339-201ENST00000404210 HPRP00739 348 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 PRB1P04280 392 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 ADORA3P0DMS8 318 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 OSMP13725 252 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 ACVR2AP27037 513 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 UQCRC1P31930 480 aa11□□□□□ -0.65
LINC00339-201ENST00000404210 RPS4XP62701 263 aaKnown RBP11□□□□□ -0.65
LINC00339-201ENST00000404210 RFX4Q33E94 735 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms