RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 PSMA8Q8TAA3 256 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 NPRL2Q8WTW4 380 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 DTD2Q96FN9 168 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 DNAJC1Q96KC8 554 aaKnown RBP4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 VPS35Q96QK1 796 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 TAAR6Q96RI8 345 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 GAL3ST4Q96RP7 486 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 RAB40CQ96S21 281 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 RUFY1Q96T51 708 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 ATP6V0BQ99437 205 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 OMDQ99983 421 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZSCAN5AQ9BUG6 496 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 STMN4Q9H169 189 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 RHOJQ9H4E5 214 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 SGK2Q9HBY8 427 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZDHHC4Q9NPG8 344 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 MED4Q9NPJ6 270 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 C20orf96Q9NUD7 363 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 SMOXQ9NWM0 555 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 FBXL12Q9NXK8 326 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 SENP1Q9P0U3 644 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 PSMC3IPQ9P2W1 217 aaPredicted RBP4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 CTSZQ9UBR2 303 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 LGALS13Q9UHV8 139 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 FBXO5Q9UKT4 447 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 FADS3Q9Y5Q0 445 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 ARL5AQ9Y689 179 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 IKBKGQ9Y6K9 419 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 MUC3AQ02505 3323 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 TMEM131Q92545 1883 aa4.01□□□□□ -1.77
HMGB3P19-201ENST00000403971 BPTFQ12830 3046 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 IGLV3-16A0A075B6K0 115 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 TRGV8A0A0C4DH27 118 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 GLYATL1P3A0A0U1RQE8 302 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 IQANK1A0A1B0GTG1 560 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZNF724A8MTY0 619 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 FBP2O00757 339 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 RGS16O15492 202 aaPredicted RBP4□□□□□ -1.77
HMGB3P19-201ENST00000403971 TM7SF2O76062 418 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 SRP72O76094 671 aaKnown RBP4□□□□□ -1.77
HMGB3P19-201ENST00000403971 OR6B1O95007 311 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 OR6A2O95222 327 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 APBB3O95704 486 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 GOT2P00505 430 aaKnown RBP4□□□□□ -1.77
HMGB3P19-201ENST00000403971 SHBGP04278 402 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 FHP07954 510 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 SNRPAP09012 282 aaKnown RBP4□□□□□ -1.77
HMGB3P19-201ENST00000403971 RPS3P23396 243 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB3P19-201ENST00000403971 GCAP28676 217 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 SPRP35270 261 aaPredicted RBP4□□□□□ -1.77
HMGB3P19-201ENST00000403971 NSG1P42857 185 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 PTGER3P43115 390 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 CXCL12P48061 93 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 CD151P48509 253 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 TPMTP51580 245 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 LIMK2P53671 638 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 HERV-K104P63124 156 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 MS4A2Q01362 244 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 CBX3Q13185 183 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 RIGQ13278 110 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 HSP90B2PQ58FF3 399 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 HENMT1Q5T8I9 393 aaKnown RBP4□□□□□ -1.77
HMGB3P19-201ENST00000403971 ZNF470Q6ECI4 717 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 B3GLCTQ6Y288 498 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 TIFABQ6ZNK6 161 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 Q6ZS52 159 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 CDHR3Q6ZTQ4 885 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 MTERF4Q7Z6M4 381 aaKnown RBP4□□□□□ -1.77
HMGB3P19-201ENST00000403971 LCA5Q86VQ0 697 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 TRIM69Q86WT6 500 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 CTAGE3PQ8IX95 158 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 PEX5LQ8IYB4 626 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 ABHD12Q8N2K0 398 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 TRAM1L1Q8N609 369 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 GPR26Q8NDV2 337 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 DENND6BQ8NEG7 585 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 TSTD1Q8NFU3 115 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 OR2T34Q8NGX1 318 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 ACMSDQ8TDX5 336 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 CXorf40AQ8TE69 158 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 DCAKDQ8WVC6 231 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 RCHY1Q96PM5 261 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 SMIM14Q96QK8 99 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 RBBP8Q99708 897 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 CHCHD5Q9BSY4 110 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 ABCG8Q9H221 673 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 LIME1Q9H400 295 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 ASB8Q9H765 288 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 SUDS3Q9H7L9 328 aaPredicted RBP4□□□□□ -1.77
HMGB3P19-201ENST00000403971 MARCH7Q9H992 704 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 TMBIM4Q9HC24 238 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 IL26Q9NPH9 171 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 DEPPQ9NTK1 212 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 SLC2A6Q9UGQ3 507 aa4□□□□□ -1.77
HMGB3P19-201ENST00000403971 MRTO4Q9UKD2 239 aaKnown RBP4□□□□□ -1.77
HMGB3P19-201ENST00000403971 SNRNP200O75643 2136 aaKnown RBP4□□□□□ -1.77
HMGB3P19-201ENST00000403971 IGLON5A6NGN9 336 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 A8MX80 341 aa3.99□□□□□ -1.77
HMGB3P19-201ENST00000403971 GPR89AB7ZAQ6 455 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms