RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 DCTN4Q9UJW0 460 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 MGAT4BQ9UQ53 548 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 NDUFAF1Q9Y375 327 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 SLC25A15Q9Y619 301 aa11.79□□□□□ -0.52
VCX3A-202ENST00000398729 A0A1W2PR80 420 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 PRORSD1PA6NEY8 169 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 SHISA9B4DS77 424 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 ANGPT2O15123 496 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 EDF1O60869 148 aaKnown RBP11.78□□□□□ -0.52
VCX3A-202ENST00000398729 SERPINB7O75635 380 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 KRT33AO76009 404 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 SOD3P08294 240 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 PTAFRP25105 342 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 GTF2E2P29084 291 aaKnown RBP11.78□□□□□ -0.52
VCX3A-202ENST00000398729 MPGP29372 298 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 RPS5P46782 204 aaKnown RBP11.78□□□□□ -0.52
VCX3A-202ENST00000398729 ZNF83P51522 516 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 CDH11P55287 796 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 NCALDP61601 193 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 C9orf135Q5VTT2 229 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 C6orf89Q6UWU4 347 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 DLEU7Q6UYE1 221 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 CREB3L2Q70SY1 520 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 ABHD12BQ7Z5M8 362 aaPredicted RBP11.78□□□□□ -0.52
VCX3A-202ENST00000398729 PIAS4Q8N2W9 510 aaPredicted RBP11.78□□□□□ -0.52
VCX3A-202ENST00000398729 C17orf78Q8N4C9 275 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 LSMEM1Q8N8F7 131 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 POMGNT2Q8NAT1 580 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 HIPK4Q8NE63 616 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 BHLHE22Q8NFJ8 381 aaPredicted RBP11.78□□□□□ -0.52
VCX3A-202ENST00000398729 DNAJA4Q8WW22 397 aaPredicted RBP11.78□□□□□ -0.52
VCX3A-202ENST00000398729 SLC25A36Q96CQ1 311 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 CPPED1Q9BRF8 314 aaPredicted RBP11.78□□□□□ -0.52
VCX3A-202ENST00000398729 AMBRA1Q9C0C7 1298 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 ALG2Q9H553 416 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 IKZF5Q9H5V7 419 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 NPHS2Q9NP85 383 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 FAIMQ9NVQ4 179 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 CISD1Q9NZ45 108 aaKnown RBP11.78□□□□□ -0.52
VCX3A-202ENST00000398729 SLC13A4Q9UKG4 626 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 ANGPT4Q9Y264 503 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 RASD1Q9Y272 281 aa11.78□□□□□ -0.52
VCX3A-202ENST00000398729 A0A0G2JND7 137 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 A0A1B0GWA3 101 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 M0R1B8 84 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 OVOL3O00110 214 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 TPST1O60507 370 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 PNMTP11086 282 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 CD40P25942 277 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 AQP1P29972 269 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 P2RY4P51582 365 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 EGR4Q05215 589 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 PGGHGQ32M88 737 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 RUNDC3AQ59EK9 446 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 ALG10BQ5I7T1 473 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 C1QTNF12Q5T7M4 302 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 KLHL24Q6TFL4 600 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 C5orf46Q6UWT4 87 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 DHDDSQ86SQ9 333 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 DEPDC4Q8N2C3 294 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 DPP10Q8N608 796 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 TSPEARQ8WU66 669 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 PTDSS2Q9BVG9 487 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 RSPO3Q9BXY4 272 aaPredicted RBP11.77□□□□□ -0.53
VCX3A-202ENST00000398729 ZNF385DQ9H6B1 395 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 SELENONQ9NZV5 590 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 TESQ9UGI8 421 aaKnown RBP11.77□□□□□ -0.53
VCX3A-202ENST00000398729 POU2F3Q9UKI9 436 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 AMDHD2Q9Y303 409 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 MAGED1Q9Y5V3 778 aaPredicted RBP11.77□□□□□ -0.53
VCX3A-202ENST00000398729 ABCA1O95477 2261 aa11.77□□□□□ -0.53
VCX3A-202ENST00000398729 OR6C65A6NJZ3 312 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 FTCDNL1E5RQL4 147 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 OR2T1O43869 369 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 SASH3O75995 380 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 WNT11O96014 354 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 CDH2P19022 906 aaPredicted RBP11.76□□□□□ -0.53
VCX3A-202ENST00000398729 HTR2AP28223 471 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 RGS8P57771 180 aaPredicted RBP11.76□□□□□ -0.53
VCX3A-202ENST00000398729 PRPS1P60891 318 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 RBBP4Q09028 425 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 ETFDHQ16134 617 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 ADRM1Q16186 407 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 CYP51A1Q16850 503 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 GLIPR1L2Q4G1C9 344 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 FAM69AQ5T7M9 428 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 METTL21CQ5VZV1 264 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 FAM91A1Q658Y4 838 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 ULK3Q6PHR2 472 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 SLC22A25Q6T423 547 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 NET1Q7Z628 596 aaPredicted RBP11.76□□□□□ -0.53
VCX3A-202ENST00000398729 COMTD1Q86VU5 262 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 ARMC8Q8IUR7 673 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 WDR31Q8NA23 367 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 C11orf65Q8NCR3 313 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 SLC38A4Q969I6 547 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 KTI12Q96EK9 354 aaPredicted RBP11.76□□□□□ -0.53
VCX3A-202ENST00000398729 ANKRD27Q96NW4 1050 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 CGREF1Q99674 301 aa11.76□□□□□ -0.53
VCX3A-202ENST00000398729 C1QTNF6Q9BXI9 259 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms