RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SMPDL3BQ92485 455 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 PARPBPQ9NWS1 579 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 LAMP5Q9UJQ1 280 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 PCOLCE2Q9UKZ9 415 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 LSM5Q9Y4Y9 91 aaKnown RBP5.05□□□□□ -1.6
PTPRD-205ENST00000397611 A0A0A6YYD5 115 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 GSTZ1O43708 216 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-205ENST00000397611 TMPRSS11DO60235 418 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 SLC34A2O95436 690 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 AKAIN1P0CW23 69 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 PLA1AQ53H76 456 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 PXKQ7Z7A4 578 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 TMEM200AQ86VY9 491 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 RNF175Q8N4F7 328 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 OR52I1Q8NGK6 324 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 MS4A4EQ96PG1 132 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 ACTRT3Q9BYD9 372 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 EGLN3Q9H6Z9 239 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 ZDHHC4Q9NPG8 344 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 CXXC1Q9P0U4 656 aaPredicted RBP5.05□□□□□ -1.6
PTPRD-205ENST00000397611 PPP4R1LQ9P1A2 415 aa5.05□□□□□ -1.6
PTPRD-205ENST00000397611 NUMA1Q14980 2115 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 RTCAO00442 366 aaKnown RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CDC123O75794 336 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 AHSA1O95433 338 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 GLAP06280 429 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SYPP08247 313 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 OR8U9P0C7N5 309 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 NID1P14543 1247 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CPN1P15169 458 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ELNP15502 786 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ATP5A1P25705 553 aaKnown RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SHC1P29353 583 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CBFBQ13951 182 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 RBM39Q14498 530 aaKnown RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 RAB11BQ15907 218 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 RNASE10Q5GAN6 216 aaKnown RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CLLU1Q5K131 121 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SLC6A19Q695T7 634 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SFXN4Q6P4A7 337 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF322Q6U7Q0 402 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SLC16A13Q7RTY0 426 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 DEFB128Q7Z7B8 93 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SLC35F2Q8IXU6 374 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 OR52H1Q8NGJ2 320 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 PHB2Q99623 299 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 UFSP2Q9NUQ7 469 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 C5AR2Q9P296 337 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 IL36AQ9UHA7 158 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ELF5Q9UKW6 265 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 C19orf53Q9UNZ5 99 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 D6RAR5 112 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CBX7O95931 251 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 FABP1P07148 127 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ANXA7P20073 488 aaKnown RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CFPP27918 469 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 HTRA4P83105 476 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CCSMST1Q4G0I0 132 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ELFN2Q5R3F8 820 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 VASNQ6EMK4 673 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 MFSD12Q6NUT3 480 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 H3F3CQ6NXT2 135 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 DPPA2Q7Z7J5 298 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 OR6V1Q8N148 313 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 OR4K13Q8NH42 304 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 FAM131CQ96AQ9 280 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 UTP23Q9BRU9 249 aaKnown RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 C20orf24Q9BUV8 137 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 DPH1Q9BZG8 443 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 GLIPR2Q9H4G4 154 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 C11orf49Q9H6J7 331 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CYP8B1Q9UNU6 501 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 FAM221BA6H8Z2 402 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SHOXO15266 292 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 RAD1O60671 282 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ATG12O94817 140 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 MELTFP08582 738 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 TFPIP10646 304 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 C6P13671 934 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 EIF1AXP47813 144 aaKnown RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CLDN12P56749 244 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ACTA2P62736 377 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ACTG2P63267 376 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 COL9A2Q14055 689 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-205ENST00000397611 PIP5KL1Q5T9C9 394 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 LMNTD1Q8N9Z9 388 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 NAXEQ8NCW5 288 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 CAPNS2Q96L46 248 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 STACQ99469 402 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SLC6A17Q9H1V8 727 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 NDRG3Q9UGV2 375 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 FLVCR2Q9UPI3 526 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SLC6A5Q9Y345 797 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 SMCO3A2RU48 225 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 TGM5O43548 720 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 RAB3DO95716 219 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ADRB3P13945 408 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 FAM74A1Q5RGS3 127 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ACSM5Q6NUN0 579 aa5.04□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF585AQ6P3V2 769 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms