RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 TRUB1Q8WWH5 349 aaKnown RBP24.73■■□□□ 1.55
CPNE1-203ENST00000397442 HDAC2Q92769 488 aaKnown RBP24.73■■□□□ 1.55
CPNE1-203ENST00000397442 HIST1H2ACQ93077 130 aa24.73■■□□□ 1.55
CPNE1-203ENST00000397442 OR5B2Q96R09 309 aa24.73■■□□□ 1.55
CPNE1-203ENST00000397442 MRPL39Q9NYK5 338 aaKnown RBP24.73■■□□□ 1.55
CPNE1-203ENST00000397442 M0R082 166 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 SURF4O15260 269 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 PPP1R3DO95685 299 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 GRK5P34947 590 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 UCNP55089 124 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 SMN1Q16637 294 aaKnown RBP24.72■■□□□ 1.55
CPNE1-203ENST00000397442 TBR1Q16650 682 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 RNFT1Q5M7Z0 435 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 ZADH2Q8N4Q0 377 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 ZNF417Q8TAU3 575 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 ZNF587Q96SQ5 575 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-203ENST00000397442 NRIP3Q9NQ35 241 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 HDGFL3Q9Y3E1 203 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 K7EM74 188 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 MPZL2O60487 215 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 TNFAIP8O95379 198 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 HOXD11P31277 338 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-203ENST00000397442 FMO3P31513 532 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 MLLT10P55197 1068 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 PPIAP62937 165 aaKnown RBP24.72■■□□□ 1.55
CPNE1-203ENST00000397442 FOXK2Q01167 660 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 MFSD13AQ14CX5 517 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 SNAPC1Q16533 368 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 DPY19L2P2Q6ZN68 376 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 SNRNP27Q8WVK2 155 aaKnown RBP24.72■■□□□ 1.55
CPNE1-203ENST00000397442 TM9SF4Q92544 642 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 SFXN2Q96NB2 322 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 ZNF696Q9H7X3 374 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 BAIAP2Q9UQB8 552 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 MYRFQ9Y2G1 1151 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 CORINQ9Y5Q5 1042 aa24.72■■□□□ 1.55
CPNE1-203ENST00000397442 A0A087WV48 116 aa24.71■■□□□ 1.55
CPNE1-203ENST00000397442 MAGEA13PA6NCF6 341 aa24.71■■□□□ 1.55
CPNE1-203ENST00000397442 EIF4E1BA6NMX2 242 aaKnown RBP24.71■■□□□ 1.55
CPNE1-203ENST00000397442 PLPP3O14495 311 aa24.71■■□□□ 1.55
CPNE1-203ENST00000397442 SLC2A10O95528 541 aa24.71■■□□□ 1.55
CPNE1-203ENST00000397442 ALG10Q5BKT4 473 aa24.71■■□□□ 1.55
CPNE1-203ENST00000397442 ZNF362Q5T0B9 420 aaPredicted RBP24.71■■□□□ 1.55
CPNE1-203ENST00000397442 SLC38A2Q96QD8 506 aa24.71■■□□□ 1.55
CPNE1-203ENST00000397442 ASPNQ9BXN1 380 aa24.71■■□□□ 1.55
CPNE1-203ENST00000397442 QPCTLQ9NXS2 382 aa24.71■■□□□ 1.55
CPNE1-203ENST00000397442 ALKBH4Q9NXW9 302 aa24.71■■□□□ 1.55
CPNE1-203ENST00000397442 ADAM18Q9Y3Q7 739 aa24.71■■□□□ 1.55
CPNE1-203ENST00000397442 TRIM64A6NGJ6 449 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 TLX2O43763 284 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-203ENST00000397442 SMNDC1O75940 238 aaKnown RBP eCLIP24.7■■□□□ 1.541e-15■■■■□ 21.1
CPNE1-203ENST00000397442 HMGN1P05114 100 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 RPL4P36578 427 aaKnown RBP24.7■■□□□ 1.54
CPNE1-203ENST00000397442 TEKQ02763 1124 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 PMS2P3Q13401 168 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 UNQ6494/PRO21346Q6UXR6 183 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 SLC22A16Q86VW1 577 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 FAM26EQ8N5C1 309 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 SCAIQ8N9R8 606 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 MIB2Q96AX9 1013 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 TAPBPLQ9BX59 468 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 YTHDF1Q9BYJ9 559 aaKnown RBP24.7■■□□□ 1.54
CPNE1-203ENST00000397442 PRRG3Q9BZD7 231 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 TRAPPC4Q9Y296 219 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 GPR52Q9Y2T5 361 aa24.7■■□□□ 1.54
CPNE1-203ENST00000397442 MED19A0JLT2 244 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-203ENST00000397442 SLC1A7O00341 560 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 F13BP05160 661 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 CRHBPP24387 322 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 DIO1P49895 249 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 CXCR4P61073 352 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 TMEM201Q5SNT2 666 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 SLC25A30Q5SVS4 291 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 SLC35F1Q5T1Q4 408 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 TMPPEQ6ZT21 453 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 TMEM163Q8TC26 289 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 ZNF566Q969W8 418 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 ERMAPQ96PL5 475 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-203ENST00000397442 KATNB1Q9BVA0 655 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 TEX12Q9BXU0 123 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 IER3IP1Q9Y5U9 82 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 A0A0J9YW62 118 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 MKRN2OSH3BPM6 223 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 XPNPEP2O43895 674 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 ADORA3P0DMS8 318 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 PMP22Q01453 160 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 RBM48Q5RL73 367 aaKnown RBP24.69■■□□□ 1.54
CPNE1-203ENST00000397442 H1FNTQ75WM6 255 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-203ENST00000397442 FAM122BQ7Z309 247 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 BCDIN3DQ7Z5W3 292 aaKnown RBP24.69■■□□□ 1.54
CPNE1-203ENST00000397442 GGNQ86UU5 652 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 FAM109AQ8N4B1 249 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 SMPDL3BQ92485 455 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 CMC2Q9NRP2 79 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 SLC6A5Q9Y345 797 aa24.69■■□□□ 1.54
CPNE1-203ENST00000397442 CACNA1GO43497 2377 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 MS4A18H0YCH9 400 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 ARPC3O15145 178 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 PMS2P2O95744 297 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 CD14P08571 375 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms