RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 LOC100130705A0A1B0GUX0 176 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 NPIPA5E9PKD4 350 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 M0R082 166 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 TP53P04637 393 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 TSPAN19P0C672 248 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 UQCRC1P31930 480 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 CTU2Q2VPK5 515 aaKnown RBP21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 ARHGAP11AQ6P4F7 1023 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 PAQR6Q6TCH4 344 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 KIF18BQ86Y91 864 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 PM20D2Q8IYS1 436 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 LRRC17Q8N6Y2 441 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 EXD3Q8N9H8 876 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 ZNF417Q8TAU3 575 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 TFAP2CQ92754 450 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 ADGRG7Q96K78 797 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 TNFRSF13CQ96RJ3 184 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 ZNF587Q96SQ5 575 aaPredicted RBP21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 EGLN3Q9H6Z9 239 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 MCCC2Q9HCC0 563 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 NPIPA1Q9UND3 350 aa21.16■□□□□ 0.98
TSPAN4-202ENST00000397396 OR14I1A6ND48 311 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 ZAR1LA6NP61 321 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 BLOC1S5-TXNDC5H3BN57 136 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 TNFSF11O14788 317 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 BCKDKO14874 412 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 OPN1LWP04000 364 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 CPN1P15169 458 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 STARP49675 285 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 CLDN18P56856 261 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 CLDN20P56880 219 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 CARD18P57730 90 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 ADARB1P78563 741 aaKnown RBP21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 PTGES3Q15185 160 aaKnown RBP21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 ZNF239Q16600 458 aaKnown RBP21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 ALG10Q5BKT4 473 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 CHMP1BQ7LBR1 199 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 UBQLNLQ8IYU4 475 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 GHDCQ8N2G8 530 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 SETD9Q8NE22 299 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 HRASLS5Q96KN8 279 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 GPR137Q96N19 417 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 ZNF570Q96NI8 536 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 GPX7Q96SL4 187 aaPredicted RBP21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 PITX2Q99697 317 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 APOL4Q9BPW4 351 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 TSSK6Q9BXA6 273 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 GMPPBQ9Y5P6 360 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 MPDZO75970 2070 aa21.15■□□□□ 0.98
TSPAN4-202ENST00000397396 VAMP5O95183 116 aa21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 RPL4P36578 427 aaKnown RBP21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 TPD52P55327 224 aaPredicted RBP21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 CDC42P60953 191 aa21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 PUDPQ08623 228 aa21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 ZP4Q12836 540 aa21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 DPY19L2P2Q6ZN68 376 aa21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 DEPDC4Q8N2C3 294 aa21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 Q8NA96 180 aa21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 OR10D3Q8NH80 312 aa21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 SAMD8Q96LT4 415 aa21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 NDRG4Q9ULP0 352 aaKnown RBP21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 RASD1Q9Y272 281 aa21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 LOC400499M0QZD8 3231 aa21.14■□□□□ 0.97
TSPAN4-202ENST00000397396 A0A1W2PNV4 684 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 AQP7P3A6NL99 342 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 PLPP3O14495 311 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 ADORA3P0DMS8 318 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 APEHP13798 732 aaKnown RBP21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 ENPP1P22413 925 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 EIF1AXP47813 144 aaKnown RBP21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 GIPRP48546 466 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 AGFG1P52594 562 aaKnown RBP21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 RPL18Q07020 188 aaKnown RBP21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 ST3GAL2Q16842 350 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 C6orf52Q5T4I8 152 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 SLX4IPQ5VYV7 408 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 CASP12Q6UXS9 341 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 DNAJA3Q96EY1 480 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 CNTNAP3BQ96NU0 1288 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 SLC38A2Q96QD8 506 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 TIMP4Q99727 224 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 IFT27Q9BW83 186 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 ANKRD60Q9BZ19 345 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 CNTNAP3Q9BZ76 1288 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 PLA2G12AQ9BZM1 189 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 TSPAN10Q9H1Z9 355 aaPredicted RBP21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 FANCFQ9NPI8 374 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 LUZP4Q9P127 313 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 LRRC42Q9Y546 428 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 HSPE1-MOB4S4R3N1 261 aa21.13■□□□□ 0.97
TSPAN4-202ENST00000397396 ACACBO00763 2458 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 CFAP47Q6ZTR5 3102 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 E9PQ18 207 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 RNF13O43567 381 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 IDH3BO43837 385 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 HMGN1P05114 100 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 ACADSP16219 412 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 GGT2P36268 569 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 AQP2P41181 271 aa21.12■□□□□ 0.97
TSPAN4-202ENST00000397396 CDK5Q00535 292 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms