RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 RIMS4Q9H426 269 aaPredicted RBP11.52□□□□□ -0.57
SMU1-201ENST00000397149 SFXN1Q9H9B4 322 aa11.52□□□□□ -0.57
SMU1-201ENST00000397149 ZMAT3Q9HA38 289 aaKnown RBP11.52□□□□□ -0.57
SMU1-201ENST00000397149 HHLA2Q9UM44 414 aa11.52□□□□□ -0.57
SMU1-201ENST00000397149 HTR3AP46098 478 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 OR1D4P47884 311 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 TAS2R19P59542 299 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 C19orf35Q6ZS72 473 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 SIGLECL1Q8N7X8 197 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 OR5AR1Q8NGP9 310 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 FYTTD1Q96QD9 318 aaKnown RBP11.51□□□□□ -0.57
SMU1-201ENST00000397149 STACQ99469 402 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 GAR1Q9NY12 217 aaKnown RBP11.51□□□□□ -0.57
SMU1-201ENST00000397149 ATP23Q9Y6H3 246 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 SPINT2O43291 252 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 ADH4P08319 380 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 OSMP13725 252 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 IL4RP24394 825 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 KRTDAPP60985 99 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 NETO1Q8TDF5 533 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 RLN3Q8WXF3 142 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 EMG1Q92979 244 aaKnown RBP11.51□□□□□ -0.57
SMU1-201ENST00000397149 ELP4Q96EB1 424 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 SLC35E1Q96K37 410 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 CTDSP1Q9GZU7 261 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 RNASE1P07998 156 aaKnown RBP11.51□□□□□ -0.57
SMU1-201ENST00000397149 HAPLN1P10915 354 aaPredicted RBP11.51□□□□□ -0.57
SMU1-201ENST00000397149 BTNL8Q6UX41 500 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 HIST2H3AQ71DI3 136 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 AAED1Q7RTV5 226 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 RAB7BQ96AH8 199 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 TIMD4Q96H15 378 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 NARFLQ9H6Q4 476 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 ABCD4O14678 606 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 LAMP1P11279 417 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 PTP4A2Q12974 167 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 SELPLGQ14242 412 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 LYSMD4Q5XG99 296 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 C17orf107Q6ZR85 190 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 SIMC1Q8NDZ2 872 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 OR8B4Q96RC9 309 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 GMLQ99445 158 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 NXF2Q9GZY0 626 aaKnown RBP11.51□□□□□ -0.57
SMU1-201ENST00000397149 FBXO8Q9NRD0 319 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 ARID1BQ8NFD5 2236 aaPredicted RBP11.51□□□□□ -0.57
SMU1-201ENST00000397149 CASP3P42574 277 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 GPR85P60893 370 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 SERTAD2Q14140 314 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 GDPD1Q8N9F7 314 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 OR4C5Q8NGB2 326 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 APIPQ96GX9 242 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 METTL17Q9H7H0 456 aaPredicted RBP11.51□□□□□ -0.57
SMU1-201ENST00000397149 ZNF541Q9H0D2 1346 aa11.51□□□□□ -0.57
SMU1-201ENST00000397149 GLI4P10075 376 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 ELAVL4P26378 380 aaKnown RBP11.5□□□□□ -0.57
SMU1-201ENST00000397149 P2RY2P41231 377 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 FKBP1AP62942 108 aaKnown RBP11.5□□□□□ -0.57
SMU1-201ENST00000397149 ALKBH6Q3KRA9 238 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 OR52B6Q8NGF0 335 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 DVL3Q92997 716 aaPredicted RBP11.5□□□□□ -0.57
SMU1-201ENST00000397149 RAB3CQ96E17 227 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 MS4A4EQ96PG1 132 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 OR2M2Q96R28 347 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 OR7D2Q96RA2 312 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 ZNF785A8K8V0 405 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 PPP1R2P9O14990 202 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 HOXC8P31273 242 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 JAM2P57087 298 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 SERINC5Q86VE9 423 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 LACC1Q8IV20 430 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 NHLRC2Q8NBF2 726 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 OR5A2Q8NGI9 324 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 OR10R2Q8NGX6 335 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 PIGTQ969N2 578 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 FAM117AQ9C073 453 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 MSL2Q9HCI7 577 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 ADAM10O14672 748 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 PDGFAP04085 211 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 NQO2P16083 231 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 FAM69AQ5T7M9 428 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 OSTM1Q86WC4 334 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 PNPLA1Q8N8W4 532 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 FGGYQ96C11 551 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 SOX7Q9BT81 388 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 MCOLN1Q9GZU1 580 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 MED20Q9H944 212 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 OR7C2O60412 319 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 ZNF217O75362 1048 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 HPNP05981 417 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 PVRP15151 417 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 TAS2R60P59551 318 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 RUNX3Q13761 415 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 PSAPL1Q6NUJ1 521 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 COMMD6Q7Z4G1 85 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 NIPA2Q8N8Q9 360 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 ADAMTS18Q8TE60 1221 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 UTP23Q9BRU9 249 aaKnown RBP11.5□□□□□ -0.57
SMU1-201ENST00000397149 PRAMEF25A6NGN4 478 aa11.5□□□□□ -0.57
SMU1-201ENST00000397149 GPR39O43194 453 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms