RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 FOXL2P58012 376 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 ZP2Q05996 745 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 SHBQ15464 509 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 XKRXQ6PP77 449 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 ARL9Q6T311 187 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 OR8H1Q8NGG4 311 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 MOSPD2Q8NHP6 518 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 CLDN23Q96B33 292 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 TMCO6Q96DC7 493 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 MOGAT1Q96PD6 335 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 SOSTQ9BQB4 213 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 C11orf54Q9H0W9 315 aaPredicted RBP12.74□□□□□ -0.37
SNCA-204ENST00000394989 KLHL1Q9NR64 748 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 ZNF337Q9Y3M9 751 aa12.74□□□□□ -0.37
SNCA-204ENST00000394989 OR6C68A6NDL8 312 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 ARHGEF9O43307 516 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 NOS1APO75052 506 aaPredicted RBP12.73□□□□□ -0.37
SNCA-204ENST00000394989 ICOSLGO75144 302 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 SC5DO75845 299 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 DCNP07585 359 aaKnown RBP12.73□□□□□ -0.37
SNCA-204ENST00000394989 ATF4P18848 351 aaPredicted RBP12.73□□□□□ -0.37
SNCA-204ENST00000394989 ARL4DP49703 201 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 CCR4P51679 360 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 C1orf189Q5VU69 101 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 WBP2NLQ6ICG8 309 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 DPY19L2P2Q6ZN68 376 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 ZNF440Q8IYI8 595 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 PRSS58Q8IYP2 241 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 SETD6Q8TBK2 473 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 RASD2Q96D21 266 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 GAL3ST4Q96RP7 486 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 NUDT22Q9BRQ3 303 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 SCDO00767 359 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 CDK2AP1O14519 115 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 ZNF264O43296 627 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 HPGDP15428 266 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 RPL4P36578 427 aaKnown RBP12.73□□□□□ -0.37
SNCA-204ENST00000394989 DDOSTP39656 456 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 SLC3A1Q07837 685 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 GGTLC2Q14390 218 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 EBPQ15125 230 aaKnown RBP12.73□□□□□ -0.37
SNCA-204ENST00000394989 ELAVL1Q15717 326 aaKnown RBP12.73□□□□□ -0.37
SNCA-204ENST00000394989 PYDC2Q56P42 97 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 YIF1BQ5BJH7 314 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 TMPRSS9Q7Z410 1059 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 GPALPP1Q8IXQ4 340 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 CARFQ8N187 725 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 ZNF527Q8NB42 609 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 GRPEL2Q8TAA5 225 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 SLC19A3Q9BZV2 496 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 ZNF304Q9HCX3 659 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 C12orf4Q9NQ89 552 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 EXOSC3Q9NQT5 275 aaKnown RBP12.73□□□□□ -0.37
SNCA-204ENST00000394989 CIB4A0PJX0 185 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 PPM1BO75688 479 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 WISP1O95388 367 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 ERVK-25P63136 954 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 EFR3AQ14156 821 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 LYPD4Q6UWN0 246 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 SLITRK4Q8IW52 837 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 ENKURQ8TC29 256 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 ZNF501Q96CX3 271 aaPredicted RBP12.73□□□□□ -0.37
SNCA-204ENST00000394989 LRFN5Q96NI6 719 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 PCDHGB2Q9Y5G2 931 aa12.73□□□□□ -0.37
SNCA-204ENST00000394989 ELOA3DA6NLF2 546 aaPredicted RBP12.72□□□□□ -0.37
SNCA-204ENST00000394989 SEC14L5O43304 696 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 SHC1P29353 583 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 ACVR1BP36896 505 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 NAA10P41227 235 aaPredicted RBP12.72□□□□□ -0.37
SNCA-204ENST00000394989 PPP3R1P63098 170 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 ACTC1P68032 377 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 ACTA1P68133 377 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 LTBQ06643 244 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 POU4F2Q12837 409 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 P2RY14Q15391 338 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 NSDHLQ15738 373 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 ZNF74Q16587 644 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 ELOA3BQ3SY89 546 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 DMKNQ6E0U4 476 aaPredicted RBP12.72□□□□□ -0.37
SNCA-204ENST00000394989 CNIH2Q6PI25 160 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 FAM109AQ8N4B1 249 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 ELOA3Q8NG57 546 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 GPX7Q96SL4 187 aaPredicted RBP12.72□□□□□ -0.37
SNCA-204ENST00000394989 NMNAT2Q9BZQ4 307 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 DUSP15Q9H1R2 295 aaPredicted RBP12.72□□□□□ -0.37
SNCA-204ENST00000394989 KCNN2Q9H2S1 579 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 PPP1R3EQ9H7J1 279 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 ST6GALNAC2Q9UJ37 374 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 KLHL21Q9UJP4 597 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 TSPAN4O14817 238 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 ARPC3O15145 178 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 ZNF780AO75290 641 aaPredicted RBP12.72□□□□□ -0.37
SNCA-204ENST00000394989 FBLP22087 321 aaKnown RBP12.72□□□□□ -0.37
SNCA-204ENST00000394989 APEX1P27695 318 aaKnown RBP12.72□□□□□ -0.37
SNCA-204ENST00000394989 PYCR1P32322 319 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 MTNR1BP49286 362 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 TP53I3Q53FA7 332 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 OR13C5Q8NGS8 318 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 VN1R1Q9GZP7 353 aa12.72□□□□□ -0.37
SNCA-204ENST00000394989 SLA2Q9H6Q3 261 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms