RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 C6orf203Q9P0P8 240 aaPredicted RBP17.68■□□□□ 0.42
SNCA-203ENST00000394986 NBPF19A0A087WUL8 3843 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 hCG_2039718K7EN88 272 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 GYG2O15488 501 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 FZD7O75084 574 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 LSM11P83369 360 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNCA-203ENST00000394986 VLDLRP98155 873 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 MS4A2Q01362 244 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 GALNT5Q7Z7M9 940 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 OR9K2Q8NGE7 335 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 PFN4Q8NHR9 129 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 LRRC46Q96FV0 321 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 C7orf34Q96L11 122 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 TACO1Q9BSH4 297 aaKnown RBP17.67■□□□□ 0.42
SNCA-203ENST00000394986 MAN2C1Q9NTJ4 1040 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 EMC3Q9P0I2 261 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 PRSS50Q9UI38 385 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 NOSIPQ9Y314 301 aaKnown RBP17.67■□□□□ 0.42
SNCA-203ENST00000394986 FLVCR1Q9Y5Y0 555 aa17.67■□□□□ 0.42
SNCA-203ENST00000394986 PIP5K1CO60331 668 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 DIRAS1O95057 198 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 PRSS23O95084 383 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 CH25HO95992 272 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 POU2F1P14859 743 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 CCKARP32238 428 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 CBX1P83916 185 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 TMEM225Q6GV28 225 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 DMRTC2Q8IXT2 367 aaPredicted RBP17.66■□□□□ 0.42
SNCA-203ENST00000394986 OFCC1Q8IZS5 231 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 PYURFQ96I23 114 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 ZNF385AQ96PM9 386 aaKnown RBP17.66■□□□□ 0.42
SNCA-203ENST00000394986 SPOCK3Q9BQ16 436 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 BTBD10Q9BSF8 475 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 ACTR3BQ9P1U1 418 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 FOXD3Q9UJU5 478 aaPredicted RBP17.66■□□□□ 0.42
SNCA-203ENST00000394986 ENPP4Q9Y6X5 453 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 HCFC1P51610 2035 aa17.66■□□□□ 0.42
SNCA-203ENST00000394986 ENO4A6NNW6 628 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 IGHV3-9P01782 118 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 SEMG1P04279 462 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 CD79BP40259 229 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 OR3A2P47893 321 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 ST3GAL3Q11203 375 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 TRIM25Q14258 630 aaKnown RBP17.65■□□□□ 0.42
SNCA-203ENST00000394986 DNAL1Q4LDG9 190 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 LRRC17Q8N6Y2 441 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 ZIC4Q8N9L1 334 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 OR6S1Q8NH40 331 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 TMEM239Q8WW34 195 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 MARVELD3Q96A59 401 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 FNDC11Q9BVV2 318 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 NDUFAF4Q9P032 175 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 RASD1Q9Y272 281 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 UNC79Q9P2D8 2635 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 MPDZO75970 2070 aa17.65■□□□□ 0.42
SNCA-203ENST00000394986 GPR171O14626 319 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 THRBP10828 461 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 RBM34P42696 430 aaKnown RBP17.64■□□□□ 0.42
SNCA-203ENST00000394986 IL1RL1Q01638 556 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 ZNF74Q16587 644 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 LCN8Q6JVE9 175 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 CASP12Q6UXS9 341 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 H1FNTQ75WM6 255 aaPredicted RBP17.64■□□□□ 0.42
SNCA-203ENST00000394986 STK32CQ86UX6 486 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 DHFR2Q86XF0 187 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 ZNF100Q8IYN0 542 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 LINC01560Q8TB33 94 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 SF3B5Q9BWJ5 86 aaKnown RBP17.64■□□□□ 0.42
SNCA-203ENST00000394986 ASPNQ9BXN1 380 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 SLC19A3Q9BZV2 496 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 C20orf141Q9NUB4 165 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 B3GAT1Q9P2W7 334 aa17.64■□□□□ 0.42
SNCA-203ENST00000394986 TCRBV5S2A0A599 114 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 HPRP00739 348 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 MT-ND1P03886 318 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 NQO1P15559 274 aaKnown RBP17.64■□□□□ 0.41
SNCA-203ENST00000394986 IFNA8P32881 189 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 PMS2P3Q13401 168 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 IQCCQ4KMZ1 466 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 BEND4Q6ZU67 534 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 SLC46A3Q7Z3Q1 461 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 CYP4Z1Q86W10 505 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 MEX3DQ86XN8 651 aaKnown RBP17.64■□□□□ 0.41
SNCA-203ENST00000394986 KIF18BQ86Y91 864 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 EPHX4Q8IUS5 362 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 ASB9Q96DX5 294 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 KLHL4Q9C0H6 718 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 MUC13Q9H3R2 512 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 ELOVL5Q9NYP7 299 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 CORINQ9Y5Q5 1042 aa17.64■□□□□ 0.41
SNCA-203ENST00000394986 HNRNPRO43390 633 aaKnown RBP17.63■□□□□ 0.41
SNCA-203ENST00000394986 MRPL33O75394 65 aaKnown RBP17.63■□□□□ 0.41
SNCA-203ENST00000394986 VAMP5O95183 116 aa17.63■□□□□ 0.41
SNCA-203ENST00000394986 MT-ATP6P00846 226 aa17.63■□□□□ 0.41
SNCA-203ENST00000394986 UGT2B10P36537 528 aa17.63■□□□□ 0.41
SNCA-203ENST00000394986 SORDQ00796 357 aa17.63■□□□□ 0.41
SNCA-203ENST00000394986 MFSD13AQ14CX5 517 aa17.63■□□□□ 0.41
SNCA-203ENST00000394986 TRAM2Q15035 370 aa17.63■□□□□ 0.41
SNCA-203ENST00000394986 ANKRD34AQ69YU3 496 aa17.63■□□□□ 0.41
SNCA-203ENST00000394986 STAC2Q6ZMT1 411 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms