RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 SVOPLQ8N434 492 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 ZNF781Q8N8C0 355 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 HPS1Q92902 700 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 DOK1Q99704 481 aa18.31■□□□□ 0.52
TRAF4-203ENST00000394925 FBXO9Q9UK97 447 aaPredicted RBP18.31■□□□□ 0.52
TRAF4-203ENST00000394925 SH3PXD2BA1X283 911 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 OR6C65A6NJZ3 312 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 CELA3BP08861 270 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 NR2F1P10589 423 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 NPR2P20594 1047 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 S100A3P33764 101 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 DPY19L1Q2PZI1 675 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 PRAMEF8Q5VWM4 474 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 PRAMEF7Q5VXH5 474 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 C12orf54Q6X4T0 127 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 SPATA21Q7Z572 469 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 MYPOPQ86VE0 399 aaPredicted RBP18.3■□□□□ 0.52
TRAF4-203ENST00000394925 EPHX4Q8IUS5 362 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 ZNF440Q8IYI8 595 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.3■□□□□ 0.52
TRAF4-203ENST00000394925 NUP37Q8NFH4 326 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 MAGEE2Q8TD90 523 aaPredicted RBP18.3■□□□□ 0.52
TRAF4-203ENST00000394925 CCDC115Q96NT0 180 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 ZNF317Q96PQ6 595 aaPredicted RBP18.3■□□□□ 0.52
TRAF4-203ENST00000394925 NELFAQ9H3P2 528 aa18.3■□□□□ 0.52
TRAF4-203ENST00000394925 CCDC154A6NI56 674 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 A8MVM7 634 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 VSTM5A8MXK1 200 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 E9PBE3 544 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 FRS3O43559 492 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 VAMP5O95183 116 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 ANXA11P50995 505 aaKnown RBP18.29■□□□□ 0.52
TRAF4-203ENST00000394925 CLNS1AP54105 237 aaKnown RBP18.29■□□□□ 0.52
TRAF4-203ENST00000394925 CDH15P55291 814 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 NME5P56597 212 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 ROR2Q01974 943 aaKnown RBP18.29■□□□□ 0.52
TRAF4-203ENST00000394925 TRIP10Q15642 601 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 COX20Q5RI15 118 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 VRK2Q86Y07 508 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 PEX5LQ8IYB4 626 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 ZNF786Q8N393 782 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 PNPT1Q8TCS8 783 aaKnown RBP18.29■□□□□ 0.52
TRAF4-203ENST00000394925 PKNOX2Q96KN3 472 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 ZNF442Q9H7R0 627 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 DYNLRB1Q9NP97 96 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 LGALS13Q9UHV8 139 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 BTNL2Q9UIR0 455 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 PCDHB14Q9Y5E9 798 aa18.29■□□□□ 0.52
TRAF4-203ENST00000394925 DYSFO75923 2080 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 TMEM129A0AVI4 362 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 WDR91A4D1P6 747 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 IGKV3-15P01624 115 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 MYZAPP0CAP1 466 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 HOXB1P14653 301 aaPredicted RBP18.28■□□□□ 0.52
TRAF4-203ENST00000394925 IFNGR1P15260 489 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 ACAA2P42765 397 aaKnown RBP18.28■□□□□ 0.52
TRAF4-203ENST00000394925 CDKN2CP42773 168 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 ETV4P43268 484 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 COPZ1P61923 177 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 CCNIQ14094 377 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 ADRM1Q16186 407 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 C1orf140Q5VVS0 124 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 WBP2NLQ6ICG8 309 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 RINLQ6ZS11 566 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 ZNF621Q6ZSS3 439 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 KDM8Q8N371 416 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 TRIML2Q8N7C3 387 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 FAM169BQ8N8A8 192 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 UBASH3BQ8TF42 649 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 TEX37Q96LM6 180 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 ANKRD27Q96NW4 1050 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 PANX1Q96RD7 426 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 PLA2G12AQ9BZM1 189 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 LINC00470Q9BZP3 86 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 OCEL1Q9H607 264 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 MOV10Q9HCE1 1003 aaKnown RBP18.28■□□□□ 0.52
TRAF4-203ENST00000394925 RASD1Q9Y272 281 aa18.28■□□□□ 0.52
TRAF4-203ENST00000394925 CDHR4A6H8M9 788 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 LYNX1G3V0Z9 82 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 GSNP06396 782 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 LYNX1P0DP58 116 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 CBR1P16152 277 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 CFPP27918 469 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 SH3BGRP55822 239 aaPredicted RBP18.27■□□□□ 0.52
TRAF4-203ENST00000394925 ARF1P84077 181 aaKnown RBP18.27■□□□□ 0.52
TRAF4-203ENST00000394925 IFFO1Q0D2I5 559 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 RIN1Q13671 783 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 ZNF836Q6ZNA1 936 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 CDK20Q8IZL9 346 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 OR52P1PQ8NH57 321 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 CKAP2Q8WWK9 683 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 METRNQ9UJH8 293 aa18.27■□□□□ 0.52
TRAF4-203ENST00000394925 IGHV2OR16-5A0A0B4J2B6 119 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 TMEM229AB2RXF0 380 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 TYROBPO43914 113 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 IGFBP1P08833 259 aaPredicted RBP18.26■□□□□ 0.51
TRAF4-203ENST00000394925 ADRA2AP08913 450 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 TFPTP0C1Z6 253 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 LBPP18428 481 aa18.26■□□□□ 0.51
TRAF4-203ENST00000394925 CLDN17P56750 224 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms