RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 TBC1D3DA0A087WVF3 549 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 TBC1D3IA0A087WXS9 549 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 CIB4A0PJX0 185 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 TBC1D3LB9A6J9 549 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 NDUFB2O95178 105 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 CBX7O95931 251 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 CFDP00746 253 aaPredicted RBP16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 IFNA7P01567 189 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 TBC1D3HP0C7X1 549 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 SRMP19623 302 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 PUDPQ08623 228 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 FAM69AQ5T7M9 428 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 TBC1D3CQ6IPX1 549 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 COMMD7Q86VX2 200 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 GRAMD2AQ8IUY3 354 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 TBC1D3Q8IZP1 549 aaPredicted RBP16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 OR52I2Q8NH67 350 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 CEP76Q8TAP6 659 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 LRRC20Q8TCA0 184 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 TRIM2Q9C040 744 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 TWSG1Q9GZX9 223 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 POT1Q9NUX5 634 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 C2orf42Q9NWW7 574 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 EMC3Q9P0I2 261 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 CA5BQ9Y2D0 317 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 TEX51A0A1B0GUA7 166 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 I3L521 148 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 SCO1O75880 301 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 TOXO94900 526 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 ZNF250P15622 560 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 DPP4P27487 766 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 VEGFCP49767 419 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 BLVRAP53004 296 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 TMEM31Q5JXX7 168 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 OR52R1Q8NGF1 315 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 FAM3CQ92520 227 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 RADILQ96JH8 1075 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 LRFN5Q96NI6 719 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 ZFYVE21Q9BQ24 234 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 NANSQ9NR45 359 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 ACTR10Q9NZ32 417 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 UBQLN2Q9UHD9 624 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 SPACA6W5XKT8 324 aa16.81■□□□□ 0.28
PCDHA1-202ENST00000394633 VPS13AQ96RL7 3174 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 ACOD1A6NK06 481 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 IDSB3KWA1 339 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 ZNF879B4DU55 563 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 B8ZZF3 427 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 IGKV1D-16P01601 117 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 SRFP11831 508 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 PVRP15151 417 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 MAGEB1P43366 347 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 DIO1P49895 249 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 TDGQ13569 410 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 FAM53BQ14153 422 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 KIRREL2Q6UWL6 708 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 LSMEM1Q8N8F7 131 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 OR4N2Q8NGD1 307 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 ZPLD1Q8TCW7 415 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 HOXB13Q92826 284 aaPredicted RBP16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 TSACCQ96A04 125 aaPredicted RBP16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 ANKRD9Q96BM1 317 aaPredicted RBP16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 OR10A4Q9H209 315 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 EVA1BQ9NVM1 165 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 WSB2Q9NYS7 404 aaPredicted RBP16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 HEATR5AQ86XA9 2040 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 OR6C74A6NCV1 312 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 IFITM5A6NNB3 132 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 TGM6O95932 706 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 PSMB1P20618 241 aaKnown RBP16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 LCN1P31025 176 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 ACTR1BP42025 376 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 ACTR1AP61163 376 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 PON3Q15166 354 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 GRK1Q15835 563 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 STPG1Q5TH74 334 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 CDH24Q86UP0 819 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 SERPINA12Q8IW75 414 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 CA13Q8N1Q1 262 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 FTMTQ8N4E7 242 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 PIGKQ92643 395 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 FAM131CQ96AQ9 280 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 CCDC120Q96HB5 630 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 EVA1AQ9H8M9 152 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 PCOLCE2Q9UKZ9 415 aa16.8■□□□□ 0.28
PCDHA1-202ENST00000394633 H0Y8X5 98 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 GABARAPH6UMI1 98 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 AIPO00170 330 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 TPD52L2O43399 206 aaKnown RBP16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 GPRIN2O60269 458 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 LSSP48449 732 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 PSG6Q00889 435 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 GXYLT1Q4G148 440 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 FCRLAQ7L513 359 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 SIX5Q8N196 739 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 NPEPL1Q8NDH3 523 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 RPS4Y2Q8TD47 263 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 RERGQ96A58 199 aaPredicted RBP16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 MRGPRX1Q96LB2 322 aa16.79■□□□□ 0.28
PCDHA1-202ENST00000394633 HSPA12BQ96MM6 686 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms