RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 VNN3Q9NY84 501 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 KLHL9Q9P2J3 617 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 CTSFQ9UBX1 484 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 MBD1Q9UIS9 605 aaPredicted RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 SNX11Q9Y5W9 270 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 V9GYH0 126 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 NAP1L6A6NFF2 107 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 FZD7O75084 574 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 GPR75O95800 540 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 AIFM1O95831 613 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 TXNDC12O95881 172 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 HOXB1P14653 301 aaPredicted RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 RBMS1P29558 406 aaKnown RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 ACVR1BP36896 505 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 DLSTP36957 453 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 AQP2P41181 271 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 MC3RP41968 323 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 PCP4P48539 62 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 PPT1P50897 306 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 HCCSP53701 268 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 FABP9Q0Z7S8 132 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 ZNF79Q15937 498 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 VASNQ6EMK4 673 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 FRRS1Q6ZNA5 592 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 RNF165Q6ZSG1 346 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 IQCHQ86VS3 1027 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 BVESQ8NE79 360 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 DUSP18Q8NEJ0 188 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 CADM4Q8NFZ8 388 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 OR2A1Q8NGT9 310 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 STK35Q8TDR2 534 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 BMFQ96LC9 184 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 EIF5A2Q9GZV4 153 aaKnown RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 PPT2Q9UMR5 302 aa5.27□□□□□ -1.57
RFFL-202ENST00000394597 FNDC1Q4ZHG4 1894 aaPredicted RBP5.27□□□□□ -1.57
RFFL-202ENST00000394597 A0A1W2PPC1 479 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 A0A1W2PQF6 199 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 A0A1W2PRQ8 180 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 GABRPO00591 440 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 HMGN2P05204 90 aaKnown RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 LPLP06858 475 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ANXA2P07355 339 aaKnown RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 HBQ1P09105 142 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 NR2C1P13056 603 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 GTF2F2P13984 249 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 IL9P15248 144 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 NQO2P16083 231 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 PTBP1P26599 531 aaKnown RBP eCLIP5.26□□□□□ -1.572e-6■■■■□ 22.9
RFFL-202ENST00000394597 GABRA5P31644 462 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 PTH2RP49190 550 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 LUMP51884 338 aaPredicted RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 RNF4P78317 190 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 COL9A2Q14055 689 aaPredicted RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 CLINT1Q14677 625 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 SMAD2Q15796 467 aaKnown RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 LPAL2Q16609 132 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ZNF674Q2M3X9 581 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 LGALSLQ3ZCW2 172 aaPredicted RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 FAM74A1Q5RGS3 127 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 APOOLQ6UXV4 268 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 OR6V1Q8N148 313 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 CDRT4Q8N9R6 151 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 FAM98AQ8NCA5 519 aaKnown RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 SFXN5Q8TD22 340 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ELP5Q8TE02 316 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 PATE1Q8WXA2 126 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 NAT6Q93015 286 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 MS4A4EQ96PG1 132 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 SORCS2Q96PQ0 1159 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 PTDSS2Q9BVG9 487 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 SEMA4CQ9C0C4 833 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 MKKSQ9NPJ1 570 aaPredicted RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 FARSAQ9Y285 508 aaKnown RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 GVINP1Q7Z2Y8 2422 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 VWA8A3KMH1 1905 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 MYOFQ9NZM1 2061 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 SLC22A23A1A5C7 686 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 BLACEA4D250 179 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 YY2O15391 372 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 CER1O95813 267 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 MT-ND5P03915 603 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 GPX2P18283 190 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 CD53P19397 219 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 ELK1P19419 428 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 AHCYP23526 432 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 GRK6P43250 576 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 OR2B8PP59922 312 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 CTAG1AP78358 180 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 LRIF1Q5T3J3 769 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 POMZP3Q6PJE2 187 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 CLEC9AQ6UXN8 241 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 FAM220AQ7Z4H9 259 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 HSD17B13Q7Z5P4 300 aaPredicted RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 PEG10Q86TG7 708 aaKnown RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 FRMD1Q8N878 549 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 OR9A4Q8NGU2 314 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 OR52N1Q8NH53 320 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 MFSD8Q8NHS3 518 aa5.26□□□□□ -1.57
RFFL-202ENST00000394597 SMAP2Q8WU79 429 aaPredicted RBP5.26□□□□□ -1.57
RFFL-202ENST00000394597 MS4A6EQ96DS6 147 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms