RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 PRAMEF17Q5VTA0 474 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 SIGIRRQ6IA17 410 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 GALNTL5Q7Z4T8 443 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 ERVMER34-1Q9H9K5 563 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 ING1Q9UK53 422 aaPredicted RBP14.86□□□□□ -0.03
PCDH1-203ENST00000394536 C19orf53Q9UNZ5 99 aaPredicted RBP14.86□□□□□ -0.03
PCDH1-203ENST00000394536 C4orf51C9J302 202 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 IGFALSP35858 605 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 PER3P56645 1201 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 BTN2A1Q7KYR7 527 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 ARMC10Q8N2F6 343 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 C1QTNF6Q9BXI9 259 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 GSX2Q9BZM3 304 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 SIGLEC7Q9Y286 467 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 GPR89AB7ZAQ6 455 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 ACOT7O00154 380 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 GPR89BP0CG08 455 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 ZNF250P15622 560 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 FAM209AQ5JX71 171 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 APOBEC4Q8WW27 367 aaKnown RBP14.86□□□□□ -0.03
PCDH1-203ENST00000394536 G6PC3Q9BUM1 346 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 FBXL2Q9UKC9 423 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 HEATR5BQ9P2D3 2071 aa14.86□□□□□ -0.03
PCDH1-203ENST00000394536 CTSVO60911 334 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 EPPINO95925 133 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 DCTDP32321 178 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 LRRN1Q6UXK5 716 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 BAIAP2L2Q6UXY1 529 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 SDR16C5Q8N3Y7 309 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 OR51D1Q8NGF3 324 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 COX14Q96I36 57 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 ADOQ96SZ5 270 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 TAS2R3Q9NYW6 316 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 NLRC5Q86WI3 1866 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 ZNF593O00488 134 aaPredicted RBP14.85□□□□□ -0.03
PCDH1-203ENST00000394536 APEHP13798 732 aaKnown RBP14.85□□□□□ -0.03
PCDH1-203ENST00000394536 SMUG1Q53HV7 270 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 HEPHL1Q6MZM0 1159 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 VN1R4Q7Z5H5 301 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 OR11H7Q8NGC8 314 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 THAP3Q8WTV1 239 aaPredicted RBP14.85□□□□□ -0.03
PCDH1-203ENST00000394536 NARFLQ9H6Q4 476 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 ZNF346Q9UL40 294 aaKnown RBP14.85□□□□□ -0.03
PCDH1-203ENST00000394536 MRPS2Q9Y399 296 aaKnown RBP14.85□□□□□ -0.03
PCDH1-203ENST00000394536 SPINT1O43278 529 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 ARHGDIBP52566 201 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 HHEXQ03014 270 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 LTBQ06643 244 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 CAMK2BQ13554 666 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 LIPNQ5VXI9 398 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 Q6ZSR6 202 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 OR10H5Q8NGA6 315 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 DUSP19Q8WTR2 217 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 PELI1Q96FA3 418 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 LRIT1Q9P2V4 623 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 RWDD3Q9Y3V2 267 aa14.85□□□□□ -0.03
PCDH1-203ENST00000394536 P2RX6O15547 441 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 AMY2AP04746 511 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 HTR2AP28223 471 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 PRSS3P35030 304 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 CCR9P51686 369 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 AGFG1P52594 562 aaKnown RBP14.84□□□□□ -0.03
PCDH1-203ENST00000394536 PPP2CBP62714 309 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 PPP2CAP67775 309 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 CDK5R1Q15078 307 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 SMAD2Q15796 467 aaKnown RBP14.84□□□□□ -0.03
PCDH1-203ENST00000394536 UBE2NLQ5JXB2 153 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 FAM69AQ5T7M9 428 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 RNLSQ5VYX0 342 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 FBXO42Q6P3S6 717 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 SSX6Q7RTT6 188 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 CRIPAKQ8N1N5 446 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 TEX101Q9BY14 249 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 MFFQ9GZY8 342 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 KIR3DX1Q9H7L2 352 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 CPNE7Q9UBL6 633 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 CXorf51AA0A1B0GTR3 108 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 TMEM150CB9EJG8 249 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 NFYAP23511 347 aaPredicted RBP14.84□□□□□ -0.03
PCDH1-203ENST00000394536 EMDP50402 254 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 SLC25A30Q5SVS4 291 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 FOXRED2Q8IWF2 684 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 OR2T4Q8NH00 348 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 GPER1Q99527 375 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 ARPC5LQ9BPX5 153 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 DUSP22Q9NRW4 184 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 UPB1Q9UBR1 384 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 EXOGQ9Y2C4 368 aaKnown RBP14.84□□□□□ -0.03
PCDH1-203ENST00000394536 GMDSO60547 372 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 CYB5AP00167 134 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 HPXP02790 462 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 FGL2Q14314 439 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 EOGTQ5NDL2 527 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 ARHGAP40Q5TG30 622 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 ZAR1Q86SH2 424 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 ZNF687Q8N1G0 1237 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 BEST3Q8N1M1 668 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 OR52B4Q8NGK2 314 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 SMIM19Q96E16 107 aa14.84□□□□□ -0.03
PCDH1-203ENST00000394536 KANTRA0A1W2PQU2 76 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms