RNA–Protein interactions for RNA: ENST00000394243.5

SYNPO-202, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 7,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-202ENST00000394243 ZNF888P0CJ79 500 aaPredicted RBP11.04□□□□□ -0.64
SYNPO-202ENST00000394243 HLA-FP30511 346 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 SNTB1Q13884 538 aaKnown RBP11.04□□□□□ -0.64
SYNPO-202ENST00000394243 SOWAHCQ53LP3 525 aaPredicted RBP11.04□□□□□ -0.64
SYNPO-202ENST00000394243 OR4C5Q8NGB2 326 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 ANKRD9Q96BM1 317 aaPredicted RBP11.04□□□□□ -0.64
SYNPO-202ENST00000394243 SLC41A2Q96JW4 573 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 NDRG3Q9UGV2 375 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 V9GYS6 101 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 CYB5BO43169 146 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 KLHDC8BQ8IXV7 354 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 OR9A4Q8NGU2 314 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 OR2G3Q8NGZ4 309 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 OR7D2Q96RA2 312 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 NIPSNAP1Q9BPW8 284 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 PELI2Q9HAT8 420 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 MED16Q9Y2X0 877 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 SNED1Q8TER0 1413 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 ADAM23O75077 832 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 CR2P20023 1033 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 HOXA9P31269 272 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 RPS21P63220 83 aaKnown RBP11.04□□□□□ -0.64
SYNPO-202ENST00000394243 TAF9Q16594 264 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 PLCXD3Q63HM9 321 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 LFNGQ8NES3 379 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 OR51S1Q8NGJ8 323 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 IRF7Q92985 503 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 REEP6Q96HR9 211 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 RTP3Q9BQQ7 232 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 PLEK2Q9NYT0 353 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 J3QR89 54 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 HPNP05981 417 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 TSFMP43897 325 aaKnown RBP11.04□□□□□ -0.64
SYNPO-202ENST00000394243 OR7A5Q15622 319 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 PRR22Q8IZ63 422 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 NLGN4YQ8NFZ3 816 aaPredicted RBP11.04□□□□□ -0.64
SYNPO-202ENST00000394243 OR5B2Q96R09 309 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 CREBZFQ9NS37 354 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 PRELID3BQ9Y3B1 194 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 CSAG2Q9Y5P2 127 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 INSL5Q9Y5Q6 135 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 DLG5Q8TDM6 1919 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 ANKUB1A6NFN9 424 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 TMEM212A6NML5 194 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 KCNK5O95279 499 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 PTBP3O95758 552 aaKnown RBP11.04□□□□□ -0.64
SYNPO-202ENST00000394243 UBL4AP11441 157 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 CDC20Q12834 499 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 C21orf62-AS1Q17RA5 79 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 RNLSQ5VYX0 342 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 ANGPTL6Q8NI99 470 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 ZNF596Q8TC21 504 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 DIO2Q92813 273 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 TSSK2Q96PF2 358 aa11.04□□□□□ -0.64
SYNPO-202ENST00000394243 IGLON5A6NGN9 336 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 CFIP05156 583 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 CCNJQ5T5M9 372 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 PM20D1Q6GTS8 502 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 TMEM182Q6ZP80 229 aaPredicted RBP11.03□□□□□ -0.64
SYNPO-202ENST00000394243 APCDD1Q8J025 514 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 LSMEM2Q8N112 164 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 SUMF1Q8NBK3 374 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 OR1S2Q8NGQ3 325 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 RYDENQ9NUL5 291 aaKnown RBP11.03□□□□□ -0.64
SYNPO-202ENST00000394243 PDE4DIPQ5VU43 2346 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 NUDT19A8MXV4 375 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 SOCS7O14512 581 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 OPRD1P41143 372 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 HTR3AP46098 478 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 SLC7A9P82251 487 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 NSDHLQ15738 373 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 TMEM164Q5U3C3 297 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 AADACL3Q5VUY0 350 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 PDCD1LG2Q9BQ51 273 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 TMEM175Q9BSA9 504 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 ALOXE3Q9BYJ1 711 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 ANKRD19PQ9H560 264 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 SLC23A2Q9UGH3 650 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 ETV7Q9Y603 341 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 OR6C68A6NDL8 312 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 DOK2O60496 412 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 SLC11A1P49279 550 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 VASPP50552 380 aaPredicted RBP11.03□□□□□ -0.64
SYNPO-202ENST00000394243 MLF1P58340 268 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 HAGHQ16775 308 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 ARHGAP11BQ3KRB8 267 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 SMIM15Q7Z3B0 74 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 SECTM1Q8WVN6 248 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 SLC25A21Q9BQT8 299 aaPredicted RBP11.03□□□□□ -0.64
SYNPO-202ENST00000394243 TOLLIPQ9H0E2 274 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 SPNS1Q9H2V7 528 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 NQO2P16083 231 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 NTF3P20783 257 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 FIGLAQ6QHK4 219 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 PIANPQ8IYJ0 282 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 OR5AR1Q8NGP9 310 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 OR14L1PQ8NHC6 308 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 TMED6Q8WW62 240 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 ASB17Q8WXJ9 295 aa11.03□□□□□ -0.64
SYNPO-202ENST00000394243 TMEM106AQ96A25 262 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms