RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 RCBTB1Q8NDN9 531 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 OR9A4Q8NGU2 314 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 RGP1Q92546 391 aaPredicted RBP17.25■□□□□ 0.35
CBX1-202ENST00000393408 RNF166Q96A37 237 aaPredicted RBP17.25■□□□□ 0.35
CBX1-202ENST00000393408 RBCK1Q9BYM8 510 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 NANSQ9NR45 359 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 DZANK1Q9NVP4 752 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 CPNE7Q9UBL6 633 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 SCML1Q9UN30 329 aa17.25■□□□□ 0.35
CBX1-202ENST00000393408 PRR32B1ATL7 298 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 PPM1BO75688 479 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 MPC2O95563 127 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 KLF8O95600 359 aaPredicted RBP17.24■□□□□ 0.35
CBX1-202ENST00000393408 TGM6O95932 706 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 HNRNPA2B1P22626 353 aaKnown RBP17.24■□□□□ 0.35
CBX1-202ENST00000393408 SELENOPP49908 381 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 ZNF81P51508 661 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 PPP1CAP62136 330 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 ERVK-25P63136 954 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 ILF3Q12906 894 aaKnown RBP eCLIP17.24■□□□□ 0.35
CBX1-202ENST00000393408 ISXQ2M1V0 245 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 GPR139Q6DWJ6 353 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 SFTPA2Q8IWL1 248 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 CCDC3Q9BQI4 270 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 DPCDQ9BVM2 203 aaPredicted RBP17.24■□□□□ 0.35
CBX1-202ENST00000393408 IGFLR1Q9H665 355 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 AKAP7Q9P0M2 348 aaPredicted RBP17.24■□□□□ 0.35
CBX1-202ENST00000393408 ZNF337Q9Y3M9 751 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 HEATR5AQ86XA9 2040 aa17.24■□□□□ 0.35
CBX1-202ENST00000393408 EFCAB7A8K855 629 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 TGFBR3LH3BV60 316 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 PRAF2O60831 178 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 OR7A10O76100 309 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 ECDO95905 644 aaPredicted RBP17.23■□□□□ 0.35
CBX1-202ENST00000393408 CTSBP07858 339 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 PSMB1P20618 241 aaKnown RBP17.23■□□□□ 0.35
CBX1-202ENST00000393408 SSTR2P30874 369 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 MAGEB1P43366 347 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 SRSF5Q13243 272 aaKnown RBP17.23■□□□□ 0.35
CBX1-202ENST00000393408 ELFN2Q5R3F8 820 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 ZNF684Q5T5D7 378 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 LINC01590Q5TEZ4 76 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 FCRLAQ7L513 359 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 NLRC3Q7RTR2 1065 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 RADILQ96JH8 1075 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 SPACA7Q96KW9 195 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 GLTPQ9NZD2 209 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 REV3LO60673 3130 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 FAM221BA6H8Z2 402 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 NAP1L6A6NFF2 107 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 GLCEO94923 617 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 ZFPL1O95159 310 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 RPS4XP62701 263 aaKnown RBP17.23■□□□□ 0.35
CBX1-202ENST00000393408 SNTA1Q13424 505 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 IL10RAQ13651 578 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 Q6ZTK2 550 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 SLC35F3Q8IY50 421 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 ZNF433Q8N7K0 673 aaPredicted RBP17.23■□□□□ 0.35
CBX1-202ENST00000393408 OR2T35Q8NGX2 323 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 RIT1Q92963 219 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 WSB2Q9NYS7 404 aaPredicted RBP17.23■□□□□ 0.35
CBX1-202ENST00000393408 KLHL9Q9P2J3 617 aa17.23■□□□□ 0.35
CBX1-202ENST00000393408 PSMD9O00233 223 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 TMEM127O75204 238 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 ITGA10O75578 1167 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 KRT33AO76009 404 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 GRPRP30550 384 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 PTH2RP49190 550 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 VEGFCP49767 419 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 UBE2IP63279 158 aaKnown RBP17.22■□□□□ 0.35
CBX1-202ENST00000393408 EXOSC2Q13868 293 aaKnown RBP17.22■□□□□ 0.35
CBX1-202ENST00000393408 ARHGEF39Q8N4T4 335 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 MAP6Q96JE9 813 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 METTL17Q9H7H0 456 aaPredicted RBP17.22■□□□□ 0.35
CBX1-202ENST00000393408 LIN7BQ9HAP6 207 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 LRIT1Q9P2V4 623 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 V9GY05 133 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 RPS10-NUDT3A0A1W2PQS6 291 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 ZSCAN5BA6NJL1 495 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 CSTAP01040 98 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 CLDN12P56749 244 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 STPG1Q5TH74 334 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 SERPINA12Q8IW75 414 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 EID2Q8N6I1 236 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 FAM71CQ8NEG0 241 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 C3orf49Q96BT1 292 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 GPX7Q96SL4 187 aaPredicted RBP17.22■□□□□ 0.35
CBX1-202ENST00000393408 CLEC4MQ9H2X3 399 aaPredicted RBP17.22■□□□□ 0.35
CBX1-202ENST00000393408 FAM60AQ9NP50 221 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 FOXJ3Q9UPW0 622 aa17.22■□□□□ 0.35
CBX1-202ENST00000393408 A0A1B0GUH1 482 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 A0A1B0GVT2 93 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 SERINC4A6NH21 518 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 IFNA7P01567 189 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 ENPP1P22413 925 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 PSMD4P55036 377 aaKnown RBP17.21■□□□□ 0.35
CBX1-202ENST00000393408 AP3S2P59780 193 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 POU4F3Q15319 338 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 DEFB110Q30KQ9 67 aa17.21■□□□□ 0.35
CBX1-202ENST00000393408 PWWP2BQ6NUJ5 590 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms