RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 FAM180AQ6UWF9 173 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 ARSKQ6UWY0 536 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 THSD4Q6ZMP0 1018 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 SATL1Q86VE3 508 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 SLC43A2Q8N370 569 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 ZFP62Q8NB50 900 aaPredicted RBP12.24□□□□□ -0.45
PTN-202ENST00000393083 OR2M7Q8NG81 312 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 TMEM163Q8TC26 289 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 IPCEF1Q8WWN9 437 aaPredicted RBP12.24□□□□□ -0.45
PTN-202ENST00000393083 PLEKHA8Q96JA3 519 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 Q96MT0 163 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 TNFRSF13CQ96RJ3 184 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 IFT27Q9BW83 186 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 CCDC90BQ9GZT6 254 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 UBQLN3Q9H347 655 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 DUSP21Q9H596 190 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 PLCXD1Q9NUJ7 323 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 MED17Q9NVC6 651 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 METRNQ9UJH8 293 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 ZNF337Q9Y3M9 751 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 NCKAP5O14513 1909 aa12.24□□□□□ -0.45
PTN-202ENST00000393083 TRAV36DV7A0A075B6V5 113 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 BHLHE40O14503 412 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 SURF4O15260 269 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 RGS10O43665 173 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 ENTPD6O75354 484 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 PTP4A3O75365 173 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 WISP2O76076 250 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 NDUFB2O95178 105 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 WISP1O95388 367 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 PPP1R3DO95685 299 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 CRYABP02511 175 aaKnown RBP12.23□□□□□ -0.45
PTN-202ENST00000393083 HMGN1P05114 100 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 PLA2G2AP14555 144 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 GTF2A1P52655 376 aaPredicted RBP12.23□□□□□ -0.45
PTN-202ENST00000393083 IGFBP7Q16270 282 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 OCLNQ16625 522 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 KCTD8Q6ZWB6 473 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 FAM26EQ8N5C1 309 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 LRRC17Q8N6Y2 441 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 FADS6Q8N9I5 356 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 FAM98AQ8NCA5 519 aaKnown RBP12.23□□□□□ -0.45
PTN-202ENST00000393083 KTI12Q96EK9 354 aaPredicted RBP12.23□□□□□ -0.45
PTN-202ENST00000393083 SLX1AQ9BQ83 275 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 FAM173AQ9BQD7 235 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 ANGPTL4Q9BY76 406 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 ENKD1Q9H0I2 346 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 VCX3AQ9NNX9 186 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 AMBNQ9NP70 447 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 ERVK-18Q9QC07 812 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 PSORS1C1Q9UIG5 152 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 FBXL2Q9UKC9 423 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 GPR52Q9Y2T5 361 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 SHANK1Q9Y566 2161 aa12.23□□□□□ -0.45
PTN-202ENST00000393083 PRRC2CQ9Y520 2896 aaKnown RBP12.23□□□□□ -0.45
PTN-202ENST00000393083 ZC3H12DA2A288 527 aaKnown RBP12.22□□□□□ -0.45
PTN-202ENST00000393083 SNPHO15079 494 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 GLSO94925 669 aaPredicted RBP12.22□□□□□ -0.45
PTN-202ENST00000393083 RPS5P46782 204 aaKnown RBP12.22□□□□□ -0.45
PTN-202ENST00000393083 ALDH3B2P48448 385 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 MASP1P48740 699 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 DNASE1L1P49184 302 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 TDGF1P3P51864 188 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 DLX5P56178 289 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 RPS4XP62701 263 aaKnown RBP12.22□□□□□ -0.45
PTN-202ENST00000393083 FOXK1P85037 733 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 FHL1Q13642 323 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 NEDD8Q15843 81 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 PLPPR5Q32ZL2 321 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 GXYLT1Q4G148 440 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 SYT14P1Q58G82 188 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 MEDAGQ5VYS4 303 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 BCDIN3DQ7Z5W3 292 aaKnown RBP12.22□□□□□ -0.45
PTN-202ENST00000393083 ADGRG3Q86Y34 549 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 SIAH3Q8IW03 269 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 SPARTQ8N0X7 666 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 LNX2Q8N448 690 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 WDSUB1Q8N9V3 476 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 GGHQ92820 318 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 TAAR8Q969N4 342 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 LRR1Q96L50 414 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 MOGAT1Q96PD6 335 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 NPAS1Q99742 590 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 COPS4Q9BT78 406 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 PTGES2Q9H7Z7 377 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 NANSQ9NR45 359 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 BAIAP2Q9UQB8 552 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 FREM3P0C091 2139 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 KIAA1549Q9HCM3 1950 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 CLCA1A8K7I4 914 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 A8MVM7 634 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 SHISA8B8ZZ34 492 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 MRPS14O60783 128 aaKnown RBP12.22□□□□□ -0.45
PTN-202ENST00000393083 TRIM3O75382 744 aaPredicted RBP12.22□□□□□ -0.45
PTN-202ENST00000393083 AHSA1O95433 338 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 BGLAPP02818 100 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 MT-ND2P03891 347 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 TCEA1P23193 301 aaKnown RBP12.22□□□□□ -0.45
PTN-202ENST00000393083 RFC3P40938 356 aa12.22□□□□□ -0.45
PTN-202ENST00000393083 APOBEC1P41238 236 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms